CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014880_P002	Maize	extracellular	95.8	95.47
OQU78915	Sorghum	cytoskeleton, cytosol, nucleus	94.06	93.73
Os12t0403800-02	Rice	cytosol	90.91	91.55
Zm00001d014882_P005	Maize	cytosol	86.01	91.45
TraesCS7D01G302500.1	Wheat	cytosol	88.81	88.81
TraesCS7B01G206000.1	Wheat	cytosol	88.81	88.81
TraesCS7A01G305800.1	Wheat	cytosol	88.46	88.46
KRH08468	Soybean	cytosol	80.77	80.77
VIT_04s0008g06260.t01	Wine grape	cytosol	80.42	80.14
KRH70124	Soybean	endoplasmic reticulum, nucleus	79.37	79.37
HORVU7Hr1G072710.9	Barley	cytosol, plastid	89.86	77.64
GSMUA_Achr4P23580_001	Banana	cytosol	81.47	77.15
AT3G07750.2	Thale cress	cytosol	75.52	75.52
PGSC0003DMT400032572	Potato	cytosol	75.87	75.35
CDY22130	Canola	cytosol	73.78	73.26
Bra040025.1-P	Field mustard	cytosol	73.78	73.26
CDY35960	Canola	cytosol	72.03	70.31
Bra029674.1-P	Field mustard	cytosol	72.03	70.31
Solyc08g007520.2.1	Tomato	nucleus	76.22	66.06
CDY28020	Canola	cytoskeleton, cytosol, nucleus	70.63	64.13
KRH14064	Soybean	cytosol, nucleus, plastid	54.9	63.31
EES15299	Sorghum	cytosol	27.62	25.82
KXG30375	Sorghum	nucleus	31.82	20.27

Protein Annotations

MapMan:16.8.1.1.3	Gene3D:3.30.230.70	EntrezGene:8069238	UniProt:C5Z2L4	EnsemblPlants:EER90439	ProteinID:EER90439
ProteinID:EER90439.1	InterPro:ExoRNase_PH_dom1	InterPro:ExoRNase_PH_dom2	InterPro:ExoRNase_PH_dom2_sf	GO:GO:0000176	GO:GO:0000177
GO:GO:0000467	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0017091	GO:GO:0034427	GO:GO:0034473
GO:GO:0034475	GO:GO:0034476	GO:GO:0043928	GO:GO:0071028	GO:GO:0071035	GO:GO:0071038
GO:GO:0071042	InterPro:IPR027408	PFAM:PF01138	PFAM:PF03725	InterPro:PNPase/RNase_PH_dom_sf	PANTHER:PTHR11097
PANTHER:PTHR11097:SF8	InterPro:Ribosomal_S5_D2-typ_fold	EnsemblPlantsGene:SORBI_3010G277000	SUPFAM:SSF54211	SUPFAM:SSF55666	UniParc:UPI0001A89928
RefSeq:XP_002439072.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:60997806..61003241

Molecular Weight (calculated)

30030.7 Da

IEP (calculated)

4.356

GRAVY (calculated)

0.100

Length

286 amino acids

Sequence
(BLAST)

001: MVGLSEGEKH FICGGIAQDL RTDGRRRLQF RALSVQTGVI PQANGSARVR LGATEIIASV KAELGKPSIL HPDKGKVSIF VDCSPTAEPM FEGRGSEELS
101: AELSVSLQRC LLGGKSGAGA AIDLSSLIVV EGKVCWDLYI DGLVVSSDGN LLDALAAAIK VALSDTGIPK VNVSVNAASD EEPEVDVSDE EFLQFDTSSV
201: PVIITLTKVG RHYIVDATSE EESQMSSAVS VSVNRNGQIC GLTKRGGAGL DPSVIFDMIS VAKHVSQQFI SLLDSEIAAA EAEEAE

Best Arabidopsis Sequence Match ( AT3G07750.2 )
(BLAST)

001: MGLSLGEQHF IKGGIAQDLR TDGRKRLTYR PIYVETGVIP QANGSARVRI GGTDVIASVK AEIGRPSSLQ PDKGKVAVFI DCSPTAEPTF GGRGGEELSS
101: ELALALQRCL LGGKSGAGAG INLSSLLIKE GKVCWDLYID GLVISSDGNL LDALGAAIKA ALTNTAIPKV NVSAEVADDE QPEIDISDEE YLQFDTSSVP
201: VIVTLTKVGT HYIVDATAEE ESQMSSAVSI SVNRTGHICG LTKRSGSGLD PSVILDMISV AKHVTETLMS KLDSEISAAE ACEDES

Arabidopsis Description

3'-5'-exoribonuclease family protein [Source:UniProtKB/TrEMBL;Acc:Q9FPI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.