Factsheet for HORVU7Hr1G072710.9

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G206000.1	Wheat	cytosol	84.89	98.25
TraesCS7A01G305800.1	Wheat	cytosol	84.89	98.25
TraesCS7D01G302500.1	Wheat	cytosol	83.99	97.2
EER90439	Sorghum	cytosol	77.64	89.86
Os12t0403800-02	Rice	cytosol	75.53	88.03
Zm00001d014880_P002	Maize	extracellular	75.23	86.76
OQU78915	Sorghum	cytoskeleton, cytosol, nucleus	74.92	86.41
Zm00001d014882_P005	Maize	cytosol	68.28	84.01
VIT_04s0008g06260.t01	Wine grape	cytosol	67.98	78.4
KRH08468	Soybean	cytosol	67.07	77.62
KRH70124	Soybean	endoplasmic reticulum, nucleus	66.16	76.57
GSMUA_Achr4P23580_001	Banana	cytosol	68.28	74.83
PGSC0003DMT400032572	Potato	cytosol	62.84	72.22
AT3G07750.2	Thale cress	cytosol	62.24	72.03
CDY22130	Canola	cytosol	61.33	70.49
Bra040025.1-P	Field mustard	cytosol	61.33	70.49
Bra029674.1-P	Field mustard	cytosol	59.52	67.24
CDY35960	Canola	cytosol	59.52	67.24
Solyc08g007520.2.1	Tomato	nucleus	63.14	63.33
KRH14064	Soybean	cytosol, nucleus, plastid	47.43	63.31
CDY28020	Canola	cytoskeleton, cytosol, nucleus	58.61	61.59
HORVU4Hr1G012650.14	Barley	cytosol	23.57	23.15
HORVU7Hr1G105370.12	Barley	nucleus	26.59	19.64
HORVU6Hr1G027570.6	Barley	cytosol	26.28	19.42

Protein Annotations

EnsemblPlants:HORVU7Hr1G072710.9	EnsemblPlantsGene:HORVU7Hr1G072710	Gene3D:3.30.230.70	InterPro:ExoRNase_PH_dom1	InterPro:ExoRNase_PH_dom2	InterPro:ExoRNase_PH_dom2_sf
InterPro:IPR027408	InterPro:PNPase/RNase_PH_dom_sf	InterPro:Ribosomal_S5_D2-typ_fold	PANTHER:PTHR11097	PANTHER:PTHR11097:SF8	PFAM:PF01138
PFAM:PF03725	SEG:seg	SUPFAM:SSF54211	SUPFAM:SSF55666	UniParc:UPI000B480022	UniProt:A0A287WVC6
MapMan:16.8.1.1.3	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:408186945..408193144

Molecular Weight (calculated)

32987.4 Da

IEP (calculated)

5.077

GRAVY (calculated)

-0.037

Length

331 amino acids

Sequence
(BLAST)

001: RSYPPPPPPX XXXXXXXXXX XXXXXXXRHR HRKALPPRAV HGNNKMVGLS EGEKHFICGG IAQDLRADGR TRLQFRALTV ETGIIPQANG SARVRMGATE
101: VIASVKAELG KPTILHPDKG KVSIYVDCSP TAAPMFEGRG SEELSAELSV ALQRCLLGGK SGAGAAIDLS SLIVVEGKAC WDLYIDGLVV SSDGNLLDAL
201: AAAIKVALSD TGIPKVNVSL NAEMDGEPEV DISDEEFLQF DTSGVPVIIT LTKVGKHYIV DATSEEESQM SSAVSVSVNS HGQICGLTKR GGAGLDPSVI
301: FDMISVAKNV SQRFYTLLES EIAAAEAAAD E

Best Arabidopsis Sequence Match ( AT3G07750.2 )
(BLAST)

001: MGLSLGEQHF IKGGIAQDLR TDGRKRLTYR PIYVETGVIP QANGSARVRI GGTDVIASVK AEIGRPSSLQ PDKGKVAVFI DCSPTAEPTF GGRGGEELSS
101: ELALALQRCL LGGKSGAGAG INLSSLLIKE GKVCWDLYID GLVISSDGNL LDALGAAIKA ALTNTAIPKV NVSAEVADDE QPEIDISDEE YLQFDTSSVP
201: VIVTLTKVGT HYIVDATAEE ESQMSSAVSI SVNRTGHICG LTKRSGSGLD PSVILDMISV AKHVTETLMS KLDSEISAAE ACEDES

Arabidopsis Description

3'-5'-exoribonuclease family protein [Source:UniProtKB/TrEMBL;Acc:Q9FPI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.