Factsheet for Zm00001d014882_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014880_P002	Maize	extracellular	95.17	89.2
EER90439	Sorghum	cytosol	91.45	86.01
Os12t0403800-02	Rice	cytosol	85.87	81.34
TraesCS7B01G206000.1	Wheat	cytosol	83.64	78.67
TraesCS7D01G302500.1	Wheat	cytosol	83.27	78.32
TraesCS7A01G305800.1	Wheat	cytosol	83.27	78.32
VIT_04s0008g06260.t01	Wine grape	cytosol	76.21	71.43
KRH08468	Soybean	cytosol	75.84	71.33
KRH70124	Soybean	endoplasmic reticulum, nucleus	74.35	69.93
GSMUA_Achr4P23580_001	Banana	cytosol	77.32	68.87
HORVU7Hr1G072710.9	Barley	cytosol, plastid	84.01	68.28
PGSC0003DMT400032572	Potato	cytosol	72.49	67.71
AT3G07750.2	Thale cress	cytosol	71.0	66.78
Bra040025.1-P	Field mustard	cytosol	69.14	64.58
CDY22130	Canola	cytosol	69.14	64.58
Bra029674.1-P	Field mustard	cytosol	68.03	62.46
CDY35960	Canola	cytosol	68.03	62.46
Solyc08g007520.2.1	Tomato	nucleus	72.86	59.39
CDY28020	Canola	cytoskeleton, cytosol, nucleus	66.91	57.14
KRH14064	Soybean	cytosol, nucleus, plastid	50.93	55.24
Zm00001d045898_P001	Maize	cytosol, extracellular	16.36	28.76
Zm00001d021033_P001	Maize	cytosol	12.64	23.94
Zm00001d049854_P001	Maize	cytosol	11.9	23.36
Zm00001d049855_P002	Maize	nucleus	18.22	22.69
Zm00001d042612_P001	Maize	plastid	20.82	22.22
Zm00001d044450_P001	Maize	cytosol	9.67	21.49
Zm00001d002336_P001	Maize	cytosol	13.75	21.02
Zm00001d031643_P001	Maize	cytosol	27.51	20.79
Zm00001d036997_P001	Maize	cytosol	20.45	20.45
Zm00001d016770_P002	Maize	nucleus	30.11	18.16
Zm00001d033842_P001	Maize	cytosol	16.36	14.01

Protein Annotations

EnsemblPlants:Zm00001d014882_P005	EnsemblPlants:Zm00001d014882_T005	EnsemblPlantsGene:Zm00001d014882	Gene3D:3.30.230.70	InterPro:ExoRNase_PH_dom1	InterPro:ExoRNase_PH_dom2
InterPro:ExoRNase_PH_dom2_sf	InterPro:IPR027408	InterPro:PNPase/RNase_PH_dom_sf	InterPro:Ribosomal_S5_D2-typ_fold	PANTHER:PTHR11097	PANTHER:PTHR11097:SF8
PFAM:PF01138	PFAM:PF03725	ProteinID:AQK67423.1	ProteinID:AQK67424.1	ProteinID:AQK67427.1	SEG:seg
SUPFAM:SSF54211	SUPFAM:SSF55666	UniParc:UPI0008456CCA	UniProt:A0A1D6GX62	MapMan:16.8.1.1.3	:

Description

3'-5'-exoribonuclease family protein

Coordinates

chr5:-:66936632..66939980

Molecular Weight (calculated)

28251.5 Da

IEP (calculated)

4.302

GRAVY (calculated)

0.160

Length

269 amino acids

Sequence
(BLAST)

001: MVGLSEGEKH FIRAALHRTF ALMDANGSAR VRLGATEIIA SVKAELGKPS ILHPDKGKVD IFVDCSPTAE PLFEGRGSEE LSAELSVSLQ RCLLGGKSGA
101: GAAIDLSSLI VVDGKVCWDL YIDGLVVSSD GNLLDALAVA IKVALSDTGI PKVNVSVSAA SDEEPEVDVS DEEFLQFDTS GVPIIITLTK VGRHYIVDAT
201: SEEESQMSSA VSVSVNRHGQ ICGLTKRGGA GLDPSVIFDM ISVAKHVSQQ FISLLDSEIA AAEAEEEAQ

Best Arabidopsis Sequence Match ( AT3G07750.1 )
(BLAST)

001: MGLSLGEQHF IKGGIAQDLR TDGRKRLTYR PIYVETGVIP QANGSARVRI GGTDVIASVK AEIGRPSSLQ PDKGKVAVFI DCSPTAEPTF GGRGGEELSS
101: ELALALQRCL LGGKSGAGAG INLSSLLIKE GKVCWDLYID GLVISSDGNL LDALGAAIKA ALTNTAIPKV NVSAEVADDE QPEIDISDEE YLQFDTSSVP
201: VIVTLTKVGT HYIVDATAEE ESQMSSAVSI SVNRTGHICG LTKRSGSGLD PSVILDMISV AKHVTETLMS KLDSEISAAE ACEDES

Arabidopsis Description

3'-5'-exoribonuclease family protein [Source:UniProtKB/TrEMBL;Acc:Q9FPI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.