Factsheet for TraesCS7D01G302500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G206000.1	Wheat	cytosol	98.95	98.95
TraesCS7A01G305800.1	Wheat	cytosol	98.25	98.25
EER90439	Sorghum	cytosol	88.81	88.81
Os12t0403800-02	Rice	cytosol	87.06	87.68
Zm00001d014880_P002	Maize	extracellular	86.71	86.41
OQU78915	Sorghum	cytoskeleton, cytosol, nucleus	85.66	85.37
HORVU7Hr1G072710.9	Barley	cytosol, plastid	97.2	83.99
Zm00001d014882_P005	Maize	cytosol	78.32	83.27
VIT_04s0008g06260.t01	Wine grape	cytosol	77.62	77.35
KRH08468	Soybean	cytosol	76.57	76.57
KRH70124	Soybean	endoplasmic reticulum, nucleus	75.52	75.52
GSMUA_Achr4P23580_001	Banana	cytosol	77.97	73.84
AT3G07750.2	Thale cress	cytosol	70.98	70.98
PGSC0003DMT400032572	Potato	cytosol	71.33	70.83
CDY22130	Canola	cytosol	70.28	69.79
Bra040025.1-P	Field mustard	cytosol	70.28	69.79
CDY35960	Canola	cytosol	67.83	66.21
Bra029674.1-P	Field mustard	cytosol	67.83	66.21
KRH14064	Soybean	cytosol, nucleus, plastid	54.55	62.9
Solyc08g007520.2.1	Tomato	nucleus	71.68	62.12
CDY28020	Canola	cytoskeleton, cytosol, nucleus	67.48	61.27
TraesCS4D01G074300.1	Wheat	cytosol	26.57	24.84
TraesCS7D01G445900.2	Wheat	nucleus	30.77	19.69
TraesCS6D01G130400.3	Wheat	cytosol	30.77	19.64

Protein Annotations

EnsemblPlants:TraesCS7D01G302500.1	EnsemblPlantsGene:TraesCS7D01G302500	Gene3D:3.30.230.70	InterPro:ExoRNase_PH_dom1	InterPro:ExoRNase_PH_dom2	InterPro:ExoRNase_PH_dom2_sf
InterPro:IPR027408	InterPro:PNPase/RNase_PH_dom_sf	InterPro:Ribosomal_S5_D2-typ_fold	PANTHER:PTHR11097	PANTHER:PTHR11097:SF8	PFAM:PF01138
PFAM:PF03725	SEG:seg	SUPFAM:SSF54211	SUPFAM:SSF55666	TIGR:cd11367	MapMan:16.8.1.1.3

Description

No Description!

Coordinates

chr7D:+:382730257..382735223

Molecular Weight (calculated)

29982.7 Da

IEP (calculated)

4.480

GRAVY (calculated)

0.082

Length

286 amino acids

Sequence
(BLAST)

001: MVGLSEGEKH FIRGGIAQDL RADGRRRLQF RALTVETGII PQANGSARVR MGATEVIASV KAELGKPTIL HPDKGKVSIY VDCSPTAAPM FEGRGSEELS
101: AELSVGLQRC LLGGKSGAGA AIDLSSLIVV EGKACWDLYI DGLVVSSDGN LLDALAAAIK VALSDTGIPK VNVSLNNETD GEPEVDISDE EFLQFDTSGV
201: PVIITLTKVG KHYIVDATSE EESQMSSAVS VSVNSHGQIC GLTKRGGAGL DPSVIFDMIS VAKNVSQRFY TLLESAFAAA EAVADE

Best Arabidopsis Sequence Match ( AT3G07750.2 )
(BLAST)

001: MGLSLGEQHF IKGGIAQDLR TDGRKRLTYR PIYVETGVIP QANGSARVRI GGTDVIASVK AEIGRPSSLQ PDKGKVAVFI DCSPTAEPTF GGRGGEELSS
101: ELALALQRCL LGGKSGAGAG INLSSLLIKE GKVCWDLYID GLVISSDGNL LDALGAAIKA ALTNTAIPKV NVSAEVADDE QPEIDISDEE YLQFDTSSVP
201: VIVTLTKVGT HYIVDATAEE ESQMSSAVSI SVNRTGHICG LTKRSGSGLD PSVILDMISV AKHVTETLMS KLDSEISAAE ACEDES

Arabidopsis Description

3'-5'-exoribonuclease family protein [Source:UniProtKB/TrEMBL;Acc:Q9FPI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.