CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16280	Soybean	nucleus	86.67	25.41
KRH45053	Soybean	cytosol, nucleus	84.44	25.17
GSMUA_Achr7P02490_001	Banana	cytosol	76.67	23.88
AT1G60080.1	Thale cress	cytosol	74.44	22.19
PGSC0003DMT400019417	Potato	cytosol	73.33	21.78
Solyc06g075390.2.1	Tomato	nucleus	75.56	21.05
Bra027816.1-P	Field mustard	cytosol	70.0	20.93
CDY56983	Canola	cytosol	70.0	20.93
CDY63123	Canola	cytosol	70.0	20.93
VIT_08s0007g08550.t01	Wine grape	cytosol	72.22	20.9
PGSC0003DMT400060984	Potato	golgi	75.56	20.67
Solyc10g080130.1.1	Tomato	cytosol	68.89	20.13
Os11t0311300-03	Rice	cytosol	63.33	18.63
TraesCS4A01G239300.1	Wheat	cytosol, nucleus, plastid	63.33	18.63
TraesCS4B01G075600.1	Wheat	cytosol, nucleus, plastid	63.33	18.63
TraesCS4D01G074300.1	Wheat	cytosol	63.33	18.63
EES15299	Sorghum	cytosol	60.0	17.65
HORVU4Hr1G012650.14	Barley	cytosol	63.33	16.91
Zm00001d049855_P002	Maize	nucleus	40.0	16.67
Zm00001d021033_P001	Maize	cytosol	24.44	15.49
Zm00001d049854_P001	Maize	cytosol	23.33	15.33
Zm00001d031643_P001	Maize	cytosol	58.89	14.89
Zm00001d044450_P001	Maize	cytosol	17.78	13.22
KRH14064	Soybean	cytosol, nucleus, plastid	26.67	9.68
KRH70124	Soybean	endoplasmic reticulum, nucleus	30.0	9.44
KRH08468	Soybean	cytosol	30.0	9.44
CDY33620	Canola	cytosol	18.89	8.5
KRH44119	Soybean	plasma membrane	20.0	7.96
KRH77682	Soybean	cytosol	28.89	5.95
KRH27808	Soybean	nucleus	28.89	5.53
KRH01298	Soybean	cytosol, nucleus, plastid	6.67	5.41
KRH01293	Soybean	cytosol, nucleus	3.33	2.42

Protein Annotations

Gene3D:3.30.230.70	MapMan:35.2	UniProt:A0A0R0FG37	EMBL:ACUP02011511	InterPro:ExoRNase_PH_dom1	EnsemblPlantsGene:GLYMA_18G2676001
GO:GO:0000178	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006396
GO:GO:0006401	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	InterPro:IPR027408
EnsemblPlants:KRH01295	ProteinID:KRH01295	ProteinID:KRH01295.1	PFAM:PF01138	InterPro:PNPase/RNase_PH_dom_sf	PANTHER:PTHR11097
PANTHER:PTHR11097:SF20	InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF54211	UniParc:UPI0006EDA54B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:55188519..55189803

Molecular Weight (calculated)

9624.8 Da

IEP (calculated)

5.557

GRAVY (calculated)

0.544

Length

90 amino acids

Sequence
(BLAST)

1: MLIFVISAID FHMPPICSPI VRPGRPAEAS PMVSKQLSNT ISSSRMTDLK ELSLVSGKAA WMAYLDIYCL DADGALFDAA LLSAIAALSH

Best Arabidopsis Sequence Match ( AT1G60080.1 )
(BLAST)

001: MGIPDAAQDL STEMEVDAFR RIFPLRFFER HLSESLRPDG RQLGKARDTI VNLGLVSTAD GSALAKIGST TMLAAIRMEV MTPSTDSPDE GCIAIEFHMP
101: PICSPTVRPG RPAEAAPVIS KRLSDTILSS GMIDLKELCL VSGKAAWMGY LDIYCLDADG ALFDAALLAA VAAFSNLQIP IVALNDNGRI VAVTGEKDQD
201: NALITEKEAV NKEKRKLTLK NIPFSLTCIL HKNYILADPT TEEESIMDTL VTVVLDSSDQ MVSFYKSGGA ALAYSSAIKS CVELARKRAK ELKQILGEMD
301: ID

Arabidopsis Description

3'-5'-exoribonuclease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.