CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
vacuole 2
nucleus 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70124	Soybean	endoplasmic reticulum, nucleus	37.17	29.37
KRH08468	Soybean	cytosol	36.73	29.02
KRH14064	Soybean	cytosol, nucleus, plastid	30.53	27.82
KRH01295	Soybean	plastid	7.96	20.0
KRH01293	Soybean	cytosol, nucleus	8.41	15.32
KRH45053	Soybean	cytosol, nucleus	20.35	15.23
KRH16280	Soybean	nucleus	19.47	14.33
KRH77682	Soybean	cytosol	17.7	9.15
KRH27808	Soybean	nucleus	17.26	8.3
KRH01298	Soybean	cytosol, nucleus, plastid	2.65	5.41

Protein Annotations

Gene3D:3.30.230.70	MapMan:35.2	EMBL:ACUP02004908	EnsemblPlantsGene:GLYMA_08G191000	GO:GO:0000176	GO:GO:0000177
GO:GO:0000467	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0017091
GO:GO:0034427	GO:GO:0034473	GO:GO:0034475	GO:GO:0034476	GO:GO:0043928	GO:GO:0071028
GO:GO:0071035	GO:GO:0071038	GO:GO:0071042	UniProt:I1KUS2	InterPro:IPR027408	EnsemblPlants:KRH44119
ProteinID:KRH44119	ProteinID:KRH44119.1	InterPro:PNPase/RNase_PH_dom_sf	PANTHER:PTHR11097	PANTHER:PTHR11097:SF8	InterPro:Ribosomal_S5_D2-typ_fold
SUPFAM:SSF54211	TMHMM:TMhelix	UniParc:UPI00023C68FF	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:15358165..15359809

Molecular Weight (calculated)

25866.1 Da

IEP (calculated)

5.647

GRAVY (calculated)

0.524

Length

226 amino acids

Sequence
(BLAST)

001: MVQQELEWVP QMSLPALRWL KIKMFGLISY FLTCNILLFN TITNNSFKYI VLLTMICLLA TQVQAELGKP SLLQPHKGKV FIYIDCSSTT EPAFEEYSIG
101: RGGDELRAKL SNALQCCLLG GAGIDLLSLI VVEGKICWDL YIDGLLLVQM EICHKFVPNK IELIFDFHSL LFISDNEYCI ICSLDLFSTC SIQSQVFVLI
201: FFKKPYSLYF IEVCHQETRI LSRVYV

Best Arabidopsis Sequence Match ( AT3G07750.1 )
(BLAST)

001: MGLSLGEQHF IKGGIAQDLR TDGRKRLTYR PIYVETGVIP QANGSARVRI GGTDVIASVK AEIGRPSSLQ PDKGKVAVFI DCSPTAEPTF GGRGGEELSS
101: ELALALQRCL LGGKSGAGAG INLSSLLIKE GKVCWDLYID GLVISSDGNL LDALGAAIKA ALTNTAIPKV NVSAEVADDE QPEIDISDEE YLQFDTSSVP
201: VIVTLTKVGT HYIVDATAEE ESQMSSAVSI SVNRTGHICG LTKRSGSGLD PSVILDMISV AKHVTETLMS KLDSEISAAE ACEDES

Arabidopsis Description

3'-5'-exoribonuclease family protein [Source:UniProtKB/TrEMBL;Acc:Q9FPI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.