Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22263 | Canola | cytosol | 13.44 | 59.6 |
| Os03t0268100-01 | Rice | nucleus | 59.91 | 59.1 |
| TraesCS4A01G093700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 59.23 | 58.82 |
| EER92496 | Sorghum | nucleus | 58.54 | 58.28 |
| TraesCS4B01G210700.2 | Wheat | cytosol | 58.09 | 58.22 |
| VIT_06s0004g05490.t01 | Wine grape | nucleus | 58.77 | 57.72 |
| TraesCS4D01G211400.1 | Wheat | cytosol | 58.09 | 57.69 |
| AT5G59210.1 | Thale cress | nucleus | 54.67 | 55.3 |
| KRH10215 | Soybean | cytosol | 54.21 | 54.97 |
| KRH23112 | Soybean | nucleus | 54.21 | 54.97 |
| Solyc09g055760.2.1 | Tomato | nucleus | 52.62 | 52.38 |
| CDY02864 | Canola | extracellular, golgi, vacuole | 38.95 | 52.29 |
| Zm00001d047834_P004 | Maize | cytosol | 55.81 | 51.91 |
| HORVU4Hr1G060500.11 | Barley | cytosol, nucleus | 55.35 | 48.99 |
| Zm00001d028569_P002 | Maize | cytosol | 57.4 | 43.37 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P16570_001 | EnsemblPlants:GSMUA_Achr2T16570_001 | EnsemblPlantsGene:GSMUA_Achr2G16570_001 | ncoils:Coil | PANTHER:PTHR45393 | UniParc:UPI000296C9E6 |
| UniProt:M0S8J8 | MapMan:35.2 | : | : | : | : |
Description
myosin heavy chain-related, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G16570_001]
Coordinates
chr2:+:17384089..17391213
Molecular Weight (calculated)
49870.6 Da
IEP (calculated)
5.114
GRAVY (calculated)
-0.843
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAQSRGRRT LEEIRQKRAA ERLHKVPSGS DLESANPYGM QRSEGGVRST AERDSFAVAS RIKEFENKNS ELESENQKLL ATLDEKEVQI DSLRKHLSDL
101: EQNSLPSLRK SLKDASIEKD AAIVAREDAL SQLRTIKKRL KEAEEEQYRA EQDAAALRAE LNSLQQQGLG TSFSSVPLGN SPDHVLSLEK EIMELKTELQ
201: HISLWRQQEQ QKLSEEQFRS SSLMAEKKEL EDKIASFTKK ISENASDLAV RKAISVDKEK LEKQLHDMAV MVERLESSRQ KLLMEIDSQS TEIERLFEEN
301: SNLSTSYQEA MGLAVQWENQ VKDCLKQNEQ LRYLLDKLRS EQASPSQTSD SNIQSDVEGD KGRTSDPSEV ASENLSLKDQ LAKEQSRGDA LAAEVMKLTA
401: EHRRAAQAYN TLIRLYRPVL RDIENNLMKM KQESYAVAL
101: EQNSLPSLRK SLKDASIEKD AAIVAREDAL SQLRTIKKRL KEAEEEQYRA EQDAAALRAE LNSLQQQGLG TSFSSVPLGN SPDHVLSLEK EIMELKTELQ
201: HISLWRQQEQ QKLSEEQFRS SSLMAEKKEL EDKIASFTKK ISENASDLAV RKAISVDKEK LEKQLHDMAV MVERLESSRQ KLLMEIDSQS TEIERLFEEN
301: SNLSTSYQEA MGLAVQWENQ VKDCLKQNEQ LRYLLDKLRS EQASPSQTSD SNIQSDVEGD KGRTSDPSEV ASENLSLKDQ LAKEQSRGDA LAAEVMKLTA
401: EHRRAAQAYN TLIRLYRPVL RDIENNLMKM KQESYAVAL
001: MESHHASLGR RTLEEIRQKR AAQRLSKASS GPDLSEIPNP ADFPVIRKSE SGNRLSETDV GALYSQLKEL QKKNAEMEER NKILSSKLQT KEVENESLET
101: RLNVLEQNTV PSLRKALKEI AMEKDAAVVL REDLSAQVRT LKRRVNQAEE EQYRAEEDAA SLRAELNSIQ QQAMGNSFAG MSPMGVSPDQ LPILEKEMAN
201: LKLELQKESV LRQQEQHRLA EEQTRVASLM SEKQELEQKI SVLSSRASEV SESGQKVFSV EDKEKLEKQL HDMAVALERL ESSRQKLLME IDNQSSEIEK
301: LFEENSNLSA SYQESINISN QWENQVKECL KQNVELREVL DKLRTEQAGS FSRGPSEFEA NGSHGTDTLS LKGELAKEQS RAESLSAQVL QLSAQLQQAT
401: QAYNGLMRIY KPVLRNIESS LIKLKQDGSV TVAQ
101: RLNVLEQNTV PSLRKALKEI AMEKDAAVVL REDLSAQVRT LKRRVNQAEE EQYRAEEDAA SLRAELNSIQ QQAMGNSFAG MSPMGVSPDQ LPILEKEMAN
201: LKLELQKESV LRQQEQHRLA EEQTRVASLM SEKQELEQKI SVLSSRASEV SESGQKVFSV EDKEKLEKQL HDMAVALERL ESSRQKLLME IDNQSSEIEK
301: LFEENSNLSA SYQESINISN QWENQVKECL KQNVELREVL DKLRTEQAGS FSRGPSEFEA NGSHGTDTLS LKGELAKEQS RAESLSAQVL QLSAQLQQAT
401: QAYNGLMRIY KPVLRNIESS LIKLKQDGSV TVAQ
Arabidopsis Description
AT5g59210/mnc17_100 [Source:UniProtKB/TrEMBL;Acc:Q8RY08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.