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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr3P32460_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G36290.1 GSMUA_Achr3P32460_001 AT5G11980.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400009101 Potato plastid 23.63 43.0
CDY59688 Canola golgi, plasma membrane, plastid 25.27 25.99
TraesCS1A01G039200.1 Wheat cytosol 74.18 24.64
Zm00001d024625_P002 Maize cytosol 75.27 23.22
Os10t0181700-01 Rice cytosol, plastid 76.37 22.82
KXG24418 Sorghum cytosol 74.73 22.7
HORVU7Hr1G083280.20 Barley cytosol 74.18 22.28
TraesCS1D01G040800.1 Wheat cytosol 73.63 22.26
TraesCS7B01G249900.1 Wheat cytosol 74.73 22.08
TraesCS1B01G051700.2 Wheat cytosol 72.53 21.96
TraesCS7D01G345800.1 Wheat cytosol 74.18 21.92
TraesCS7A01G338600.1 Wheat cytosol, plastid 74.18 21.92
HORVU1Hr1G006770.6 Barley cytosol 73.08 21.18
VIT_04s0023g02740.t01 Wine grape cytosol 67.58 19.19
GSMUA_Achr9P25210_001 Banana cytosol 54.95 19.12
KRH08132 Soybean cytosol 64.29 18.57
AT4G36280.1 Thale cress cytosol 62.09 18.05
AT4G36290.1 Thale cress cytosol 61.54 17.64
Solyc02g084700.2.1 Tomato cytosol 62.09 17.55
KRH69835 Soybean cytosol 62.09 17.15
GSMUA_Achr4P13250_001 Banana cytosol 54.4 15.99
AT4G36270.1 Thale cress cytosol 40.66 15.23
GSMUA_Achr11P... Banana nucleus 51.1 11.25
Bra011676.1-P Field mustard cytosol 62.09 8.84
CDY59720 Canola endoplasmic reticulum, extracellular 12.09 8.76
CDX69218 Canola cytosol 62.09 8.36
CDX75568 Canola cytosol 61.54 8.31
GSMUA_Achr1P16580_001 Banana cytosol, nucleus, peroxisome 26.92 7.61
GSMUA_Achr4P18400_001 Banana cytosol 1.65 1.46
Protein Annotations
EnsemblPlants:GSMUA_Achr4P18410_001EnsemblPlants:GSMUA_Achr4T18410_001EnsemblPlantsGene:GSMUA_Achr4G18410_001Gene3D:3.30.565.10InterPro:HATPase_CInterPro:HATPase_C_sf
InterPro:IPR036890PANTHER:PTHR23336PANTHER:PTHR23336:SF46PFAM:PF13589SignalP:SignalP-noTMSUPFAM:SSF55874
UniParc:UPI000296104AUniProt:M0SQ04MapMan:12.5.1.2:::
Description
Putative MORC family CW-type zinc finger protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G18410_001]
Coordinates
chr4:-:19238651..19243005
Molecular Weight (calculated)
20134.4 Da
IEP (calculated)
4.937
GRAVY (calculated)
0.166
Length
182 amino acids
Sequence
(BLAST)
001: MLIVISVVYA AVAELLDNAV DEIHNGATFV KVDKINNLKD NSPVLLFQDD GGGMDPEGIR RCMSLGFSSK RLKTTIGQYG NGFKTSTMRL GADAIVFSRA
101: SRGSCVTLSI GLLSYTFLRR TLKDDIFVPM LDFQIINGQI IPLSSNSQDE WDSSLKTIIE WSPFSSKEEL LLQVWYCLVG LV
Best Arabidopsis Sequence Match ( AT4G36280.1 )
(BLAST)
001: MPPMAKNAAV TDVVHLDSDS DSDNGVVGGR ESASTIAGAA TMAPRETLEC RSFWKAGDYF VIPNVVTPTA PGMLEHARVH PRFLHSNATS HKWAFGAIAE
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
Arabidopsis Description
MORC2Protein MICRORCHIDIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5FV35]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.