Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr3P32460_001 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G36290.1 | GSMUA_Achr3P32460_001 | AT5G11980.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400009101 | Potato | plastid | 23.63 | 43.0 |
CDY59688 | Canola | golgi, plasma membrane, plastid | 25.27 | 25.99 |
TraesCS1A01G039200.1 | Wheat | cytosol | 74.18 | 24.64 |
Zm00001d024625_P002 | Maize | cytosol | 75.27 | 23.22 |
Os10t0181700-01 | Rice | cytosol, plastid | 76.37 | 22.82 |
KXG24418 | Sorghum | cytosol | 74.73 | 22.7 |
HORVU7Hr1G083280.20 | Barley | cytosol | 74.18 | 22.28 |
TraesCS1D01G040800.1 | Wheat | cytosol | 73.63 | 22.26 |
TraesCS7B01G249900.1 | Wheat | cytosol | 74.73 | 22.08 |
TraesCS1B01G051700.2 | Wheat | cytosol | 72.53 | 21.96 |
TraesCS7D01G345800.1 | Wheat | cytosol | 74.18 | 21.92 |
TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 74.18 | 21.92 |
HORVU1Hr1G006770.6 | Barley | cytosol | 73.08 | 21.18 |
VIT_04s0023g02740.t01 | Wine grape | cytosol | 67.58 | 19.19 |
GSMUA_Achr9P25210_001 | Banana | cytosol | 54.95 | 19.12 |
KRH08132 | Soybean | cytosol | 64.29 | 18.57 |
AT4G36280.1 | Thale cress | cytosol | 62.09 | 18.05 |
AT4G36290.1 | Thale cress | cytosol | 61.54 | 17.64 |
Solyc02g084700.2.1 | Tomato | cytosol | 62.09 | 17.55 |
KRH69835 | Soybean | cytosol | 62.09 | 17.15 |
GSMUA_Achr4P13250_001 | Banana | cytosol | 54.4 | 15.99 |
AT4G36270.1 | Thale cress | cytosol | 40.66 | 15.23 |
GSMUA_Achr11P... | Banana | nucleus | 51.1 | 11.25 |
Bra011676.1-P | Field mustard | cytosol | 62.09 | 8.84 |
CDY59720 | Canola | endoplasmic reticulum, extracellular | 12.09 | 8.76 |
CDX69218 | Canola | cytosol | 62.09 | 8.36 |
CDX75568 | Canola | cytosol | 61.54 | 8.31 |
GSMUA_Achr1P16580_001 | Banana | cytosol, nucleus, peroxisome | 26.92 | 7.61 |
GSMUA_Achr4P18400_001 | Banana | cytosol | 1.65 | 1.46 |
Protein Annotations
EnsemblPlants:GSMUA_Achr4P18410_001 | EnsemblPlants:GSMUA_Achr4T18410_001 | EnsemblPlantsGene:GSMUA_Achr4G18410_001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
InterPro:IPR036890 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | PFAM:PF13589 | SignalP:SignalP-noTM | SUPFAM:SSF55874 |
UniParc:UPI000296104A | UniProt:M0SQ04 | MapMan:12.5.1.2 | : | : | : |
Description
Putative MORC family CW-type zinc finger protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G18410_001]
Coordinates
chr4:-:19238651..19243005
Molecular Weight (calculated)
20134.4 Da
IEP (calculated)
4.937
GRAVY (calculated)
0.166
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIVISVVYA AVAELLDNAV DEIHNGATFV KVDKINNLKD NSPVLLFQDD GGGMDPEGIR RCMSLGFSSK RLKTTIGQYG NGFKTSTMRL GADAIVFSRA
101: SRGSCVTLSI GLLSYTFLRR TLKDDIFVPM LDFQIINGQI IPLSSNSQDE WDSSLKTIIE WSPFSSKEEL LLQVWYCLVG LV
101: SRGSCVTLSI GLLSYTFLRR TLKDDIFVPM LDFQIINGQI IPLSSNSQDE WDSSLKTIIE WSPFSSKEEL LLQVWYCLVG LV
001: MPPMAKNAAV TDVVHLDSDS DSDNGVVGGR ESASTIAGAA TMAPRETLEC RSFWKAGDYF VIPNVVTPTA PGMLEHARVH PRFLHSNATS HKWAFGAIAE
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
Arabidopsis Description
MORC2Protein MICRORCHIDIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5FV35]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.