CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH07953
KRH69706

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36290.1	KRH07953	AT5G11980.1	21798944
AT4G36290.1	KRH69706	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08132	Soybean	cytosol	88.16	92.22
GSMUA_Achr4P18400_001	Banana	cytosol	19.42	62.14
GSMUA_Achr4P18410_001	Banana	extracellular	17.15	62.09
VIT_04s0023g02740.t01	Wine grape	cytosol	57.97	59.59
Solyc02g084700.2.1	Tomato	cytosol	53.87	55.12
AT4G36280.1	Thale cress	cytosol	50.23	52.88
AT4G36290.1	Thale cress	cytosol	50.68	52.6
CDY59688	Canola	golgi, plasma membrane, plastid	14.11	52.54
TraesCS1A01G039200.1	Wheat	cytosol	42.03	50.55
TraesCS1D01G040800.1	Wheat	cytosol	45.98	50.33
TraesCS1B01G051700.2	Wheat	cytosol	45.83	50.25
Zm00001d024625_P002	Maize	cytosol	44.76	50.0
KXG24418	Sorghum	cytosol	45.07	49.58
AT4G36270.1	Thale cress	cytosol	36.27	49.18
Os10t0181700-01	Rice	cytosol, plastid	45.37	49.1
PGSC0003DMT400009101	Potato	plastid	7.44	49.0
HORVU7Hr1G083280.20	Barley	cytosol	44.46	48.35
HORVU1Hr1G006770.6	Barley	cytosol	45.98	48.25
TraesCS7A01G338600.1	Wheat	cytosol, plastid	45.07	48.21
TraesCS7B01G249900.1	Wheat	cytosol	45.07	48.21
TraesCS7D01G345800.1	Wheat	cytosol	44.76	47.89
CDY59720	Canola	endoplasmic reticulum, extracellular	15.17	39.84
KRH63565	Soybean	cytosol	38.24	36.63
KRH03266	Soybean	mitochondrion	37.18	36.3
KRH41106	Soybean	nucleus	36.87	29.63
KRH59787	Soybean	nucleus	35.81	28.57
Bra011676.1-P	Field mustard	cytosol	50.99	26.29
CDX75568	Canola	cytosol	50.53	24.72
CDX69218	Canola	cytosol	50.53	24.65
KRH76501	Soybean	cytosol	18.82	18.05

Protein Annotations

EMBL:ACUP02000729	EnsemblPlants:KRH69835	EnsemblPlantsGene:GLYMA_02G051800	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:IPR036890	ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF18	PFAM:PF13589	ProteinID:KRH69835
ProteinID:KRH69835.1	SEG:seg	SUPFAM:SSF55874	UniParc:UPI0006EDE22C	UniProt:A0A0R0KYY2	MapMan:12.5.1.2

Description

hypothetical protein

Coordinates

chr2:+:4711238..4729929

Molecular Weight (calculated)

73879.7 Da

IEP (calculated)

7.322

GRAVY (calculated)

-0.436

Length

659 amino acids

Sequence
(BLAST)

001: MSLLPKTEQN DVPVVDIDSD DDGGAAVAPA KNDASSHKTP SPQVELVQQE TPSSSSSLSA SDGLSRSFWK AGDYVVGPSS KPAPFQGHLE HARVHPKFLH
101: SNATSHKWAF GAIAELVDNA VDENQNGATF VKIDKLDVKK DNSPALCFLD DGGGMNPNAI RKCMSLGYSS KKSKTTIGQY GNGFKTSTMR LGADVIVFTC
201: VTSRATQSVG LLSYTFLRRT GQDDVVVPMI DFDISGHWAE PIIYSSQHEW SANLKTILDW SPFTSKEELM LQFDDIGSHG TKVVIYNLWL NDEGIYELSF
301: DDDAEDLSNS WYPSRNRDRV SREKDLKKGF LKLINGYYAE RWATHGAEKN LCKKTVQLQS HISYRLRFSL RAYVSMLYLR KFSNFSIILR GKLVDQFNIV
401: DDLIYSKVIP YKPQLAMASN EAIVETKTTI GFIKEAAEIK VTGFNVYHKN RLIKPFWKVV ADGSSKGRCV VGVLEANFIE PAHDKQDFER SVLFIRLENK
501: LKQMTMDYWR EHCHLVGYQP PNLKSQKNVV KEAHIRKSAE HSTNPQNQLL ADQQDTSLVA EHQSGLSQSV VGLAVTGMQG LRHEHLGTIV ETPGSVSPDE
601: ICAENIKLFE RCEEYRQKET ELKQTVVDLE DELKQIQKKC TLLVSLVETK RKAKSVKGQ

Best Arabidopsis Sequence Match ( AT4G36290.1 )
(BLAST)

001: MAKNYTVADV VNIDSDSDSD DDNGGVIGMV PSLASLIENQ KVSIADAATV APRETLECRS FWKAGENFVI PSSVTLTAIG MVEHARVHPK FLHSNATSHK
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV

Arabidopsis Description

MORC1Protein MICRORCHIDIA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.