Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36290.1 | CDX70438 | AT5G11980.1 | 21798944 |
| AT4G36290.1 | CDX78461 | AT5G11980.1 | 21798944 |
| AT4G36290.1 | CDX91181 | AT5G11980.1 | 21798944 |
| AT4G36290.1 | CDY67814 | AT5G11980.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75568 | Canola | cytosol | 95.04 | 95.32 |
| Bra011676.1-P | Field mustard | cytosol | 86.9 | 91.86 |
| AT4G36290.1 | Thale cress | cytosol | 36.86 | 78.43 |
| GSMUA_Achr4P18410_001 | Banana | extracellular | 8.36 | 62.09 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 7.85 | 59.89 |
| GSMUA_Achr4P18400_001 | Banana | cytosol | 8.73 | 57.28 |
| PGSC0003DMT400009101 | Potato | plastid | 4.07 | 55.0 |
| VIT_04s0023g02740.t01 | Wine grape | cytosol | 25.98 | 54.76 |
| KRH08132 | Soybean | cytosol | 24.87 | 53.33 |
| Os10t0181700-01 | Rice | cytosol, plastid | 23.39 | 51.89 |
| Solyc02g084700.2.1 | Tomato | cytosol | 24.35 | 51.09 |
| Zm00001d024625_P002 | Maize | cytosol | 22.28 | 51.02 |
| KXG24418 | Sorghum | cytosol | 22.43 | 50.58 |
| KRH69835 | Soybean | cytosol | 24.65 | 50.53 |
| TraesCS1D01G040800.1 | Wheat | cytosol | 22.43 | 50.33 |
| TraesCS1B01G051700.2 | Wheat | cytosol | 22.35 | 50.25 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 20.21 | 49.82 |
| TraesCS7B01G249900.1 | Wheat | cytosol | 22.43 | 49.19 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 22.35 | 49.03 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 22.35 | 49.03 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 21.91 | 48.84 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 21.98 | 47.29 |
| CDX81912 | Canola | nucleus | 8.44 | 45.42 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 8.36 | 45.02 |
| CDY41018 | Canola | nucleus | 19.02 | 37.79 |
| CDY21683 | Canola | nucleus | 17.91 | 37.58 |
| CDX81913 | Canola | nucleus | 9.77 | 35.2 |
| CDY03400 | Canola | nucleus | 16.58 | 33.28 |
| CDY34330 | Canola | nucleus | 16.51 | 32.99 |
| CDX92664 | Canola | nucleus | 16.73 | 32.66 |
| CDY11045 | Canola | nucleus | 16.8 | 32.57 |
| CDY52039 | Canola | plastid | 15.91 | 31.3 |
| CDX84021 | Canola | plastid | 15.77 | 30.87 |
| CDX84876 | Canola | nucleus | 17.25 | 30.74 |
| CDY45818 | Canola | nucleus | 17.25 | 30.06 |
| CDX71661 | Canola | cytosol | 3.55 | 29.09 |
| CDX97228 | Canola | nucleus, plastid | 16.58 | 26.99 |
| CDX69668 | Canola | nucleus, plastid | 16.58 | 26.92 |
Protein Annotations
| EnsemblPlants:CDX69218 | EnsemblPlantsGene:GSBRNA2T00131022001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF18 | PFAM:PF13589 | ProteinID:CDX69218 | ProteinID:CDX69218.1 |
| SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0004EEF491 | MapMan:12.5.1.2 | : | : |
Description
BnaC01g02350D
Coordinates
chrLK031789:-:3532615..3540600
Molecular Weight (calculated)
151154.0 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.500
Length
1351 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKRKVADVV LLSDSDSDDE DIGVVRRGGG EFRRRSASLM ENRQVPSTIA DTTVTRRETL ECRSFWKAGD NFVIPKAVTP TAPGMLEHAR VHPKFLHSNA
0101: TSHKWAFGAI AELLDNAVDE IQNGATFVKI DKIDIAKDNS PALIFQDDGA GMDPDGIRKC MSLGYSSKKS NTTIGQYGNG FKTSTMRLGA DAIVFTRSTR
0201: GGKSTQSIGL LSYTFLRRTG QDDVIVPMID IDISSDLPQP IIYGTSEDWF ANLDILLKWS PFSTEDELLQ QFEDIGTHGT KVMIYNLWLN DEGVYELSFD
0301: DEDEDIRLRD ENALVRKGVV AVTLELRSHI SYRFRHSLKA YISMLYLKKF KNFKIILRGI PVEQFNIADE LRYPETIMYK PHAAAVEYAV TEIKVGFVKE
0401: APKLPVCGFN VYHKNRLIMP FWRVTLSGST SGNGVVGVLE ANFIEPAHDK QDFERSSLFQ RLEARLKKIT LDYWKCCSEA VGYHPDSRAH KSKRKATPDQ
0501: PPGDDTFNPP PLPSDKISQG GPKIREISLS KGTSSREHKS KRTKTPDQPP GDDTFNPPPL PSDKISQGGL IIREISLSKG TSSRTVALPP PHMRNFTGVR
0601: SNFQPVQPNP QPVQLNLQPV QLNPQPVQLN LQPVQLNPQP VQLNPQPAAT ESGDNLGGET AYKLSEENIQ LFMECEEYAK KETEMEQTVR NLEKELEEAK
0701: IRHHASNDAD SNSFVASSSE MSTNAKTVVA ADVVHLDSDD EDVGGGGGGG RGLSLIETPQ VPSTTANAAV APLETLECRS FWKAGESYVT PNVVSQAAPG
0801: MLEHARVHPK FLHSNATSHK WAFGAIAELL DNAVDEIQNG ATFVKIDKID IAKNNSPALV FQDDGAGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS
0901: TMRLGADAIV FSRSTRSGKA TQSVGLLSYT FLRRTGQDDV IVPMIDIDIS KERPQPIIYG SSEDWSTNLD ILLKWSPFST KDELLQQFDD IGTHGTKIII
1001: YNLWLNDEGI YELSFDDDDE DIRLRDESVH DGKRVHAKEL ERRSHISYHL RYSLRAYTSM LYLEKFKNFK IILRGIPVKQ FNIADEFRYP EIIKYRPQIA
1101: TIEQATTEIK VGFIKEAPKL PVCGYNVYHK NRLIRPFWKV TMDGSALGNG VVGVLEANFI EPAHDKQDFE RSSLFQRLEA RLKKIVYDYW SSHSHVFGYR
1201: TPQMPADKSK RIPIPDQPPT VNTFNPFPSP SSQGGPIIRE INISNATSVR TVAAPPPHMR NSTGVRNNFQ PVQLTPQPAV TDTRNKHVGK SVEEISQENI
1301: QLFMKCEEYV KKETEMEQTV RNLEKELEEA KSKCAQLAML VDAKKKEMQQ V
0101: TSHKWAFGAI AELLDNAVDE IQNGATFVKI DKIDIAKDNS PALIFQDDGA GMDPDGIRKC MSLGYSSKKS NTTIGQYGNG FKTSTMRLGA DAIVFTRSTR
0201: GGKSTQSIGL LSYTFLRRTG QDDVIVPMID IDISSDLPQP IIYGTSEDWF ANLDILLKWS PFSTEDELLQ QFEDIGTHGT KVMIYNLWLN DEGVYELSFD
0301: DEDEDIRLRD ENALVRKGVV AVTLELRSHI SYRFRHSLKA YISMLYLKKF KNFKIILRGI PVEQFNIADE LRYPETIMYK PHAAAVEYAV TEIKVGFVKE
0401: APKLPVCGFN VYHKNRLIMP FWRVTLSGST SGNGVVGVLE ANFIEPAHDK QDFERSSLFQ RLEARLKKIT LDYWKCCSEA VGYHPDSRAH KSKRKATPDQ
0501: PPGDDTFNPP PLPSDKISQG GPKIREISLS KGTSSREHKS KRTKTPDQPP GDDTFNPPPL PSDKISQGGL IIREISLSKG TSSRTVALPP PHMRNFTGVR
0601: SNFQPVQPNP QPVQLNLQPV QLNPQPVQLN LQPVQLNPQP VQLNPQPAAT ESGDNLGGET AYKLSEENIQ LFMECEEYAK KETEMEQTVR NLEKELEEAK
0701: IRHHASNDAD SNSFVASSSE MSTNAKTVVA ADVVHLDSDD EDVGGGGGGG RGLSLIETPQ VPSTTANAAV APLETLECRS FWKAGESYVT PNVVSQAAPG
0801: MLEHARVHPK FLHSNATSHK WAFGAIAELL DNAVDEIQNG ATFVKIDKID IAKNNSPALV FQDDGAGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS
0901: TMRLGADAIV FSRSTRSGKA TQSVGLLSYT FLRRTGQDDV IVPMIDIDIS KERPQPIIYG SSEDWSTNLD ILLKWSPFST KDELLQQFDD IGTHGTKIII
1001: YNLWLNDEGI YELSFDDDDE DIRLRDESVH DGKRVHAKEL ERRSHISYHL RYSLRAYTSM LYLEKFKNFK IILRGIPVKQ FNIADEFRYP EIIKYRPQIA
1101: TIEQATTEIK VGFIKEAPKL PVCGYNVYHK NRLIRPFWKV TMDGSALGNG VVGVLEANFI EPAHDKQDFE RSSLFQRLEA RLKKIVYDYW SSHSHVFGYR
1201: TPQMPADKSK RIPIPDQPPT VNTFNPFPSP SSQGGPIIRE INISNATSVR TVAAPPPHMR NSTGVRNNFQ PVQLTPQPAV TDTRNKHVGK SVEEISQENI
1301: QLFMKCEEYV KKETEMEQTV RNLEKELEEA KSKCAQLAML VDAKKKEMQQ V
001: MPPMAKNAAV TDVVHLDSDS DSDNGVVGGR ESASTIAGAA TMAPRETLEC RSFWKAGDYF VIPNVVTPTA PGMLEHARVH PRFLHSNATS HKWAFGAIAE
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
Arabidopsis Description
MORC2Protein MICRORCHIDIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5FV35]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.