Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36290.1 | CDX70438 | AT5G11980.1 | 21798944 |
| AT4G36290.1 | CDX78461 | AT5G11980.1 | 21798944 |
| AT4G36290.1 | CDX91181 | AT5G11980.1 | 21798944 |
| AT4G36290.1 | CDY67814 | AT5G11980.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69218 | Canola | cytosol | 95.32 | 95.04 |
| Bra011676.1-P | Field mustard | cytosol | 88.12 | 92.88 |
| AT4G36290.1 | Thale cress | cytosol | 37.19 | 78.9 |
| GSMUA_Achr4P18410_001 | Banana | extracellular | 8.31 | 61.54 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 8.02 | 61.02 |
| GSMUA_Achr4P18400_001 | Banana | cytosol | 8.69 | 56.8 |
| VIT_04s0023g02740.t01 | Wine grape | cytosol | 26.21 | 55.07 |
| PGSC0003DMT400009101 | Potato | plastid | 4.01 | 54.0 |
| KRH08132 | Soybean | cytosol | 24.94 | 53.33 |
| Os10t0181700-01 | Rice | cytosol, plastid | 23.46 | 51.89 |
| Solyc02g084700.2.1 | Tomato | cytosol | 24.65 | 51.55 |
| Zm00001d024625_P002 | Maize | cytosol | 22.42 | 51.19 |
| KXG24418 | Sorghum | cytosol | 22.64 | 50.92 |
| TraesCS1D01G040800.1 | Wheat | cytosol | 22.64 | 50.66 |
| TraesCS1B01G051700.2 | Wheat | cytosol | 22.57 | 50.58 |
| KRH69835 | Soybean | cytosol | 24.72 | 50.53 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 20.42 | 50.18 |
| TraesCS7B01G249900.1 | Wheat | cytosol | 22.72 | 49.68 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 22.57 | 49.35 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 22.57 | 49.35 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 22.12 | 49.17 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 22.2 | 47.61 |
| CDX81912 | Canola | nucleus | 8.46 | 45.42 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 8.31 | 44.62 |
| CDY41018 | Canola | nucleus | 18.86 | 37.35 |
| CDY21683 | Canola | nucleus | 17.74 | 37.11 |
| CDX81913 | Canola | nucleus | 9.58 | 34.4 |
| CDY03400 | Canola | nucleus | 16.78 | 33.58 |
| CDY34330 | Canola | nucleus | 16.7 | 33.28 |
| CDX92664 | Canola | nucleus | 16.85 | 32.8 |
| CDY11045 | Canola | nucleus | 16.93 | 32.71 |
| CDY52039 | Canola | plastid | 15.89 | 31.15 |
| CDX84876 | Canola | nucleus | 17.3 | 30.74 |
| CDX84021 | Canola | plastid | 15.74 | 30.72 |
| CDY45818 | Canola | nucleus | 17.3 | 30.06 |
| CDX71661 | Canola | cytosol | 3.56 | 29.09 |
| CDX97228 | Canola | nucleus, plastid | 16.56 | 26.87 |
| CDX69668 | Canola | nucleus, plastid | 16.56 | 26.8 |
Protein Annotations
| EnsemblPlants:CDX75568 | EnsemblPlantsGene:GSBRNA2T00121474001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF18 | PFAM:PF13589 | ProteinID:CDX75568 | ProteinID:CDX75568.1 |
| SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0004EEBA08 | MapMan:12.5.1.2 | : | : |
Description
BnaA01g01340D
Coordinates
chrLK031804:-:1700841..1709153
Molecular Weight (calculated)
150757.0 Da
IEP (calculated)
6.824
GRAVY (calculated)
-0.464
Length
1347 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKRTVADVV LLSDSDDEDI GVVRRGGGGG GAFRRRSASL MENRQVSSAI ADTTVTRRET LECRSFWKAG DNFVIPKAVT PTAPGMLEHA RVHPKFLHSN
0101: ATSHKWAFGA IAELLDNAVD EIQNGATFVK IDKIDIAKDN SPALVFQDDG AGMDPDGIRK CMSLGYSSKK SNTTIGQYGN GFKTSTMRLG ADAIVFTRST
0201: RGGKSTQSIG LLSYTFLRRT GQDDVIVPMI DIDTSSDLPQ PIIYGTPEDW STNLNILLKW SPFSTEDELL QQFEDIGTHG TKVMIYNLWL NDEGVYELSF
0301: DDEDEDIRLR DENALTRKGV VAVTLELRSH ISYRFRHSLK AYISMLYLKK FKNFKIILRG IPVEQFNIAD ELRYPETIMY KPHAAAVEYA VTEIKVGFVK
0401: KAPKLPVCGF NVYHKNRLIM PFWRVTLSGS TSGNGVVGVL EANFIEPAHD KQDFERSSLF QRLEARLKKI TLDYWKSRSE AVGYHPDSRA HKLKRTATPD
0501: QPPGDDTFNP SPFPSDKISQ GGPLIREISL SKGTSSRAHK SKRTATPDQP PREDTFNPSP LPSDKTSQGG LIIREISFSK GTSSRTVALP PPHMRNFTGV
0601: RSNFQPVQLN PQPPVQLNTQ PVQLNPQSVQ LNPQPAATES GDNLGGETAS KLSEENIQLF MECEEYAKKE TEMEQIVKNL EKELEEAKTL KHHAVFVFFF
0701: LFNSIESNVA DSNSFIASSS EMSPNAKTVV AADVVYLDSD DDDDVGRGLS LIETPQVPST TAAAAVAPLE TLECRSFWKA GESYVTPNVV SQAAPGMLEH
0801: ARVHPKFLHS NATSHKWAFG AIAELLDNAV DEIQNGATFV KIDKIDIAKN NSPALVFQDD GAGMDPNGIR KCMSLGYSSK KSNTTIGQYG NGFKTSTMRL
0901: GADAIVFSRS TRSGKATQSV GLLSYTFLRR TGQDDVIVPM IDIDISKERP QPIIYGSSED WSTNLDILLK WSPFSTEDEL FQQFDDIGTH GTKVIIYNLW
1001: LNDEGIYELS FDDDDEDIRL RDESVHDGKR VHAKELERRS HISYHLRYSL RAYTSMLYLE KFKNFKIILR GIPVKQFNIA DEFRYPEIIK YRPQIATIEQ
1101: ATTEIKVGFI KEAPKLPVCG YNVYHKNRLI RPFWKVTMDG SALGNGVVGV LEANFIEPAH DKQDFERSSL FQRLEARLKK IIYDYWSSHS HVFGYRTPQM
1201: PADKSKRIPI PDQPPTVNTF NPFPSPSSQG GPVIREINIS NATSVRTVAA PPPHMRNSTG VRNNFQPVQL TPQPAVTDTR NKHVGKSVEE ISQENIQLFM
1301: KCEEYVKKET EMEQTVRNLE KELEEAKSKC AQLAMLVDAK KKEMQQV
0101: ATSHKWAFGA IAELLDNAVD EIQNGATFVK IDKIDIAKDN SPALVFQDDG AGMDPDGIRK CMSLGYSSKK SNTTIGQYGN GFKTSTMRLG ADAIVFTRST
0201: RGGKSTQSIG LLSYTFLRRT GQDDVIVPMI DIDTSSDLPQ PIIYGTPEDW STNLNILLKW SPFSTEDELL QQFEDIGTHG TKVMIYNLWL NDEGVYELSF
0301: DDEDEDIRLR DENALTRKGV VAVTLELRSH ISYRFRHSLK AYISMLYLKK FKNFKIILRG IPVEQFNIAD ELRYPETIMY KPHAAAVEYA VTEIKVGFVK
0401: KAPKLPVCGF NVYHKNRLIM PFWRVTLSGS TSGNGVVGVL EANFIEPAHD KQDFERSSLF QRLEARLKKI TLDYWKSRSE AVGYHPDSRA HKLKRTATPD
0501: QPPGDDTFNP SPFPSDKISQ GGPLIREISL SKGTSSRAHK SKRTATPDQP PREDTFNPSP LPSDKTSQGG LIIREISFSK GTSSRTVALP PPHMRNFTGV
0601: RSNFQPVQLN PQPPVQLNTQ PVQLNPQSVQ LNPQPAATES GDNLGGETAS KLSEENIQLF MECEEYAKKE TEMEQIVKNL EKELEEAKTL KHHAVFVFFF
0701: LFNSIESNVA DSNSFIASSS EMSPNAKTVV AADVVYLDSD DDDDVGRGLS LIETPQVPST TAAAAVAPLE TLECRSFWKA GESYVTPNVV SQAAPGMLEH
0801: ARVHPKFLHS NATSHKWAFG AIAELLDNAV DEIQNGATFV KIDKIDIAKN NSPALVFQDD GAGMDPNGIR KCMSLGYSSK KSNTTIGQYG NGFKTSTMRL
0901: GADAIVFSRS TRSGKATQSV GLLSYTFLRR TGQDDVIVPM IDIDISKERP QPIIYGSSED WSTNLDILLK WSPFSTEDEL FQQFDDIGTH GTKVIIYNLW
1001: LNDEGIYELS FDDDDEDIRL RDESVHDGKR VHAKELERRS HISYHLRYSL RAYTSMLYLE KFKNFKIILR GIPVKQFNIA DEFRYPEIIK YRPQIATIEQ
1101: ATTEIKVGFI KEAPKLPVCG YNVYHKNRLI RPFWKVTMDG SALGNGVVGV LEANFIEPAH DKQDFERSSL FQRLEARLKK IIYDYWSSHS HVFGYRTPQM
1201: PADKSKRIPI PDQPPTVNTF NPFPSPSSQG GPVIREINIS NATSVRTVAA PPPHMRNSTG VRNNFQPVQL TPQPAVTDTR NKHVGKSVEE ISQENIQLFM
1301: KCEEYVKKET EMEQTVRNLE KELEEAKSKC AQLAMLVDAK KKEMQQV
001: MPPMAKNAAV TDVVHLDSDS DSDNGVVGGR ESASTIAGAA TMAPRETLEC RSFWKAGDYF VIPNVVTPTA PGMLEHARVH PRFLHSNATS HKWAFGAIAE
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
Arabidopsis Description
MORC2Protein MICRORCHIDIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5FV35]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.