Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019199.1-P | Field mustard | cytosol | 99.14 | 99.28 |
| CDX92664 | Canola | nucleus | 96.27 | 96.97 |
| CDY03400 | Canola | nucleus | 82.93 | 85.88 |
| CDY34330 | Canola | nucleus | 83.21 | 85.8 |
| AT4G24970.1 | Thale cress | nucleus | 79.05 | 77.93 |
| CDX84876 | Canola | nucleus | 64.99 | 59.76 |
| CDX71661 | Canola | cytosol | 14.06 | 59.39 |
| CDY45818 | Canola | nucleus | 64.85 | 58.32 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 65.71 | 55.18 |
| KRH41106 | Soybean | nucleus | 63.85 | 54.27 |
| KRH59787 | Soybean | nucleus | 64.28 | 54.24 |
| Solyc03g097520.2.1 | Tomato | nucleus | 62.55 | 52.28 |
| GSMUA_Achr11P... | Banana | nucleus | 58.11 | 48.97 |
| EES10563 | Sorghum | nucleus | 54.81 | 48.48 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 54.66 | 48.29 |
| Zm00001d053269_P001 | Maize | cytosol | 18.08 | 48.28 |
| Zm00001d004118_P003 | Maize | nucleus | 55.24 | 48.25 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 53.37 | 46.1 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 52.08 | 45.15 |
| CDX81912 | Canola | nucleus | 16.21 | 45.02 |
| CDY52039 | Canola | plastid | 44.05 | 44.69 |
| CDX84021 | Canola | plastid | 43.9 | 44.35 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 53.52 | 43.99 |
| KXG30181 | Sorghum | nucleus | 50.5 | 43.73 |
| Os02t0469300-02 | Rice | nucleus | 49.5 | 42.96 |
| CDX97228 | Canola | nucleus, plastid | 46.63 | 39.16 |
| CDX69668 | Canola | nucleus, plastid | 46.63 | 39.06 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 22.24 | 38.46 |
| CDY21683 | Canola | nucleus | 33.0 | 35.71 |
| CDY41018 | Canola | nucleus | 33.14 | 33.97 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 8.61 | 33.9 |
| Zm00001d053268_P001 | Maize | cytosol | 24.25 | 32.13 |
| CDX81913 | Canola | nucleus | 16.64 | 30.93 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 10.62 | 29.48 |
| CDX75568 | Canola | cytosol | 32.71 | 16.93 |
| CDX69218 | Canola | cytosol | 32.57 | 16.8 |
Protein Annotations
| EnsemblPlants:CDY11045 | EnsemblPlantsGene:GSBRNA2T00049002001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | PFAM:PF13589 | ProteinID:CDY11045 | ProteinID:CDY11045.1 |
| SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0004EF38F1 | UniProt:A0A078F9A8 | MapMan:12.5.1.2 | : |
Description
BnaA03g47040DBnaA03g47040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9A8]
Coordinates
chrLK032008:+:790344..794240
Molecular Weight (calculated)
78916.8 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.697
Length
697 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTDVKPETI PPYIPRDDTV TLIDLCSSDE SDVEEHVSER RRYNSVNSVG AKRGRDTSSA LDRENVKRGT VENELAVVLP PGGFDQPVPP VNMTHTFPAD
101: PCNAFSQMPA AGVSSSGRVG SCKQFWKAGD YEGAPGGNWD LSSGGFDHVR VHPKFLHSNA TSHKWALGAF AELLDNALDE VASGATYVNV DMLENKKEGN
201: RMLLIEDNGG GMDPEKMRQC MSLGYSAKSK LANTIGQYGN GFKTSTMRLG ADVIVFSRCP GKNGKSSTQS IGLLSYTFLR STGKEDIVVP MLDYEKRDTE
301: WSKIVRSSLS DWDKNVRTII QWSPFSSEED LLRQFGLMKN CGTRIIIYNL WEDDHGLLEL DFDADPHDIQ LRGVNRDEKN IKMAAQFPNS RHFLTFKHSL
401: RSYVSILYLR IPPAFRIILR GKDVEHHNVV NDMMQTEQIT YRPQYGADTY VKDSNMSAVV VLGFVKDAKH HVDVQGFNVY HKNRLIKPFW RIWNAAGSDG
501: RGVIGVLEAN FVEPAHDKQG FERTTVLSRL ETRLVQMQKI YWSTNCHKIG YAPRRYKPVN GYSHRDTSPE NDPEGSAPSG IKTRASDKFY SGSYPSYHRG
601: DNGVPGKDSS LYLQEELRRE KERSKALEDE VNIAREKIEE MSKEQENLIE IFTEERDRRD GEEENLRKKL EEASNTIEEL LNKIRKLEDS KGSSWRR
101: PCNAFSQMPA AGVSSSGRVG SCKQFWKAGD YEGAPGGNWD LSSGGFDHVR VHPKFLHSNA TSHKWALGAF AELLDNALDE VASGATYVNV DMLENKKEGN
201: RMLLIEDNGG GMDPEKMRQC MSLGYSAKSK LANTIGQYGN GFKTSTMRLG ADVIVFSRCP GKNGKSSTQS IGLLSYTFLR STGKEDIVVP MLDYEKRDTE
301: WSKIVRSSLS DWDKNVRTII QWSPFSSEED LLRQFGLMKN CGTRIIIYNL WEDDHGLLEL DFDADPHDIQ LRGVNRDEKN IKMAAQFPNS RHFLTFKHSL
401: RSYVSILYLR IPPAFRIILR GKDVEHHNVV NDMMQTEQIT YRPQYGADTY VKDSNMSAVV VLGFVKDAKH HVDVQGFNVY HKNRLIKPFW RIWNAAGSDG
501: RGVIGVLEAN FVEPAHDKQG FERTTVLSRL ETRLVQMQKI YWSTNCHKIG YAPRRYKPVN GYSHRDTSPE NDPEGSAPSG IKTRASDKFY SGSYPSYHRG
601: DNGVPGKDSS LYLQEELRRE KERSKALEDE VNIAREKIEE MSKEQENLIE IFTEERDRRD GEEENLRKKL EEASNTIEEL LNKIRKLEDS KGSSWRR
001: MDNSIHVKRE IQLPSTSPAG FPGRESVTVV DLCSSDDDSD IGEVAGGLEK VGNNFVGLKR GRDTFGGSSE VDRNNVKKVT TLAELGVGLP EGFGQSNPPE
101: SLTHPIPANP CNVFRPVPPP PPPPYAGTSG KIGGCKQFWK AGDYEGAAGD NWDLSSGGFD HVRVHPKFLH SNATSHKWAL GAFAELLDNA LDEVASGATY
201: VKVDMLENNK GGNRMLLIED NGGGMDPEKM RQCMSLGYSA KSKLANTIGQ YGNGFKTSTM RLGADVIVFS RCPGKDGKSS TQSIGLLSYT FLRSTGKEDI
301: VVPMLDYERR DPEWSKIIRS STRDWDKNVE TIIQWSPFSS EEDLLHQFDL MKDRGTRIII YNLWEDDQGM LELDFDADPY DIQLRGVNRE ERNIKMASQF
401: PNSRHFLTYK HSLRSYVSIL YLRIPPGFRI ILRGIDVEHH SVVNDMMQTE QITYRPQSES YGVVTNMSAI VIIGFVKDAK HHVDVQGFNV YHKNRLIKPF
501: WRIWNATGSD GRGVIGVLEA NFVEPAHDKQ GFERTTVLAR LESRLVQMQK TYWSTNCHKI GYAPRRREKS AYGYDNRDSS PENDREGPSS IKTPTPASDK
601: FYSSSYPNHN GDNGVSGKDG ARLQEELRRE KERRKALEVE VQLSRQKIEE MKKEQENLIE IFSEERDRRD GEEEVLRNKL EEASNTIDDL LNKIKKMEGS
701: KVPSWRH
101: SLTHPIPANP CNVFRPVPPP PPPPYAGTSG KIGGCKQFWK AGDYEGAAGD NWDLSSGGFD HVRVHPKFLH SNATSHKWAL GAFAELLDNA LDEVASGATY
201: VKVDMLENNK GGNRMLLIED NGGGMDPEKM RQCMSLGYSA KSKLANTIGQ YGNGFKTSTM RLGADVIVFS RCPGKDGKSS TQSIGLLSYT FLRSTGKEDI
301: VVPMLDYERR DPEWSKIIRS STRDWDKNVE TIIQWSPFSS EEDLLHQFDL MKDRGTRIII YNLWEDDQGM LELDFDADPY DIQLRGVNRE ERNIKMASQF
401: PNSRHFLTYK HSLRSYVSIL YLRIPPGFRI ILRGIDVEHH SVVNDMMQTE QITYRPQSES YGVVTNMSAI VIIGFVKDAK HHVDVQGFNV YHKNRLIKPF
501: WRIWNATGSD GRGVIGVLEA NFVEPAHDKQ GFERTTVLAR LESRLVQMQK TYWSTNCHKI GYAPRRREKS AYGYDNRDSS PENDREGPSS IKTPTPASDK
601: FYSSSYPNHN GDNGVSGKDG ARLQEELRRE KERRKALEVE VQLSRQKIEE MKKEQENLIE IFSEERDRRD GEEEVLRNKL EEASNTIDDL LNKIKKMEGS
701: KVPSWRH
Arabidopsis Description
MORC7Protein MICRORCHIDIA 7 [Source:UniProtKB/Swiss-Prot;Acc:F4JRS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.