Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES10563 | Sorghum | nucleus | 92.86 | 94.04 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 73.31 | 74.14 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 72.43 | 71.62 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 72.68 | 68.4 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 66.29 | 65.8 |
| Zm00001d053269_P001 | Maize | cytosol | 19.05 | 58.24 |
| CDX71661 | Canola | cytosol | 11.9 | 57.58 |
| CDY03400 | Canola | nucleus | 48.37 | 57.36 |
| CDY34330 | Canola | nucleus | 48.37 | 57.1 |
| GSMUA_Achr11P... | Banana | nucleus | 58.4 | 56.35 |
| CDX92664 | Canola | nucleus | 48.12 | 55.49 |
| Bra019199.1-P | Field mustard | cytosol | 48.37 | 55.46 |
| Bra013851.1-P | Field mustard | nucleus | 48.12 | 55.25 |
| CDY11045 | Canola | nucleus | 48.25 | 55.24 |
| AT4G24970.1 | Thale cress | nucleus | 48.37 | 54.6 |
| CDX84876 | Canola | nucleus | 49.37 | 51.98 |
| Bra022762.1-P | Field mustard | nucleus | 49.25 | 51.78 |
| KRH41106 | Soybean | nucleus | 52.38 | 50.98 |
| CDY45818 | Canola | nucleus | 49.25 | 50.71 |
| KRH59787 | Soybean | nucleus | 52.38 | 50.61 |
| Solyc03g097520.2.1 | Tomato | nucleus | 52.51 | 50.24 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 51.88 | 49.88 |
| AT5G50780.1 | Thale cress | nucleus | 49.12 | 47.86 |
| PGSC0003DMT400088594 | Potato | nucleus | 44.61 | 47.72 |
| Zm00001d053268_P001 | Maize | cytosol | 31.33 | 47.53 |
| Solyc01g009920.1.1 | Tomato | nucleus | 43.73 | 44.97 |
| CDY52039 | Canola | plastid | 38.6 | 44.83 |
| AT5G13130.1 | Thale cress | nucleus | 39.35 | 44.35 |
| CDX84021 | Canola | plastid | 38.35 | 44.35 |
| Solyc10g081760.1.1 | Tomato | nucleus | 44.74 | 42.2 |
| Zm00001d024625_P002 | Maize | cytosol | 30.58 | 41.36 |
| CDX69668 | Canola | nucleus, plastid | 40.48 | 38.82 |
| CDX97228 | Canola | nucleus, plastid | 40.35 | 38.8 |
| PGSC0003DMT400072308 | Potato | nucleus | 44.99 | 38.11 |
| Bra016690.1-P | Field mustard | plastid | 38.72 | 37.73 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 28.32 | 36.33 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 17.92 | 35.48 |
| Zm00001d044506_P006 | Maize | cytosol | 31.08 | 35.38 |
| Zm00001d043191_P005 | Maize | cytosol | 29.2 | 31.57 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 28.45 | 30.27 |
| Zm00001d045978_P002 | Maize | cytosol | 29.7 | 24.26 |
| Zm00001d046722_P007 | Maize | cytosol | 15.29 | 14.56 |
Protein Annotations
| EMBL:BT061056 | EnsemblPlants:Zm00001d004118_P003 | EnsemblPlants:Zm00001d004118_T003 | EnsemblPlantsGene:Zm00001d004118 | EntrezGene:100304405 | Gene3D:3.30.565.10 |
| InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF21 |
| PFAM:PF13589 | ProteinID:ONM18351.1 | SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0001948682 | UniProt:C0HFF0 |
| MapMan:12.5.1.2 | : | : | : | : | : |
Description
Protein MICRORCHIDIA 7
Coordinates
chr2:+:83750412..83790051
Molecular Weight (calculated)
88962.0 Da
IEP (calculated)
7.389
GRAVY (calculated)
-0.664
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSSLLRPP MVKTEAAEER EPLSRTPAAA VAVEGSGRRT ATAVIDLSSS DSDSDGEGAV GSGKRVRGVG GDGSATKRAR VSAVVDLPPG FLEPIPPPPV
101: PVPLAACATK QFWKAGDYDG KPLGDGVAQQ SVSGMDHVRV HPRFLHSNAT SHKWALGALA ELLDNSLDEV INGATYVNID VLENDKDIDK KKSRMLLVED
201: DGGGMDPDKM RQCMSLGYSA KSKVASTIGQ YGNGFKTSTM RLGADVLVFS RSPGKSGKRP TQSIGMLSYT FLRSTGKEDI IVPMIDYEYK QGWERMVRTT
301: LDDWSTSFQT IITWSPYSTE AELLEQFSSM KDRGTRIIIY NLWEDDQGDL ELDFDAEIHD IQLRGGNRDE KNIQMANQFP NSKHYLTYRH SLRSYASILY
401: LRLPTYFQMI LRGKEIEHHN IVTDMMLKKE VTYRPVAPNG HPKDSNMVAD VTIGFVKDAK HHIDVQGFNV YHMNRLIKPF WRVWTAAGSG GRGVIGVLEA
501: NFIEPAHDKQ DFERTTLLAR LEARLVQMQK DYWSGNAHRI GYVAPRFGRN TEAGDGEDSP ENTASAQPSP YHSGKGYTHA KDLSNNIKKG GKASTSFGIQ
601: QRAEKSARTK RSTKSILHGL SDSDNSDSEF MGTLSRSRSH TLKTNRKLFQ NGSTGLITPQ SSGLIERERV RTKSQPLDPK ATSNGDLHTM DEYQSVIMQL
701: RDENSSLKER LSKMEESMSQ ELVVECDKNK SLTERVEDLQ RQLESATKEQ EALIDIFSEE RNRRDQEEES LRKKLKDASS TIQDLLEQLN AARKGRKV
101: PVPLAACATK QFWKAGDYDG KPLGDGVAQQ SVSGMDHVRV HPRFLHSNAT SHKWALGALA ELLDNSLDEV INGATYVNID VLENDKDIDK KKSRMLLVED
201: DGGGMDPDKM RQCMSLGYSA KSKVASTIGQ YGNGFKTSTM RLGADVLVFS RSPGKSGKRP TQSIGMLSYT FLRSTGKEDI IVPMIDYEYK QGWERMVRTT
301: LDDWSTSFQT IITWSPYSTE AELLEQFSSM KDRGTRIIIY NLWEDDQGDL ELDFDAEIHD IQLRGGNRDE KNIQMANQFP NSKHYLTYRH SLRSYASILY
401: LRLPTYFQMI LRGKEIEHHN IVTDMMLKKE VTYRPVAPNG HPKDSNMVAD VTIGFVKDAK HHIDVQGFNV YHMNRLIKPF WRVWTAAGSG GRGVIGVLEA
501: NFIEPAHDKQ DFERTTLLAR LEARLVQMQK DYWSGNAHRI GYVAPRFGRN TEAGDGEDSP ENTASAQPSP YHSGKGYTHA KDLSNNIKKG GKASTSFGIQ
601: QRAEKSARTK RSTKSILHGL SDSDNSDSEF MGTLSRSRSH TLKTNRKLFQ NGSTGLITPQ SSGLIERERV RTKSQPLDPK ATSNGDLHTM DEYQSVIMQL
701: RDENSSLKER LSKMEESMSQ ELVVECDKNK SLTERVEDLQ RQLESATKEQ EALIDIFSEE RNRRDQEEES LRKKLKDASS TIQDLLEQLN AARKGRKV
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.