Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84876 | Canola | nucleus | 99.21 | 99.34 |
| AT5G50780.1 | Thale cress | nucleus | 74.04 | 68.62 |
| Bra013851.1-P | Field mustard | nucleus | 60.74 | 66.33 |
| Bra019199.1-P | Field mustard | cytosol | 59.68 | 65.09 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 59.42 | 54.34 |
| KRH41106 | Soybean | nucleus | 56.39 | 52.2 |
| Solyc03g097520.2.1 | Tomato | nucleus | 56.79 | 51.68 |
| KRH59787 | Soybean | nucleus | 56.13 | 51.57 |
| EES10563 | Sorghum | nucleus | 51.52 | 49.62 |
| Zm00001d004118_P003 | Maize | nucleus | 51.78 | 49.25 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 51.12 | 49.18 |
| Zm00001d053269_P001 | Maize | cytosol | 16.73 | 48.66 |
| GSMUA_Achr11P... | Banana | nucleus | 52.31 | 48.0 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 50.46 | 47.46 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 48.22 | 45.52 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 50.59 | 45.28 |
| KXG30181 | Sorghum | nucleus | 47.17 | 44.47 |
| Os02t0469300-02 | Rice | nucleus | 46.38 | 43.84 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 20.03 | 37.72 |
| Bra016690.1-P | Field mustard | plastid | 40.18 | 37.24 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 29.91 | 36.5 |
| Bra031063.1-P | Field mustard | nucleus | 31.62 | 36.04 |
| Zm00001d053268_P001 | Maize | cytosol | 24.11 | 34.79 |
| Bra011676.1-P | Field mustard | cytosol | 30.43 | 18.08 |
Protein Annotations
| EnsemblPlants:Bra022762.1 | EnsemblPlants:Bra022762.1-P | EnsemblPlantsGene:Bra022762 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
| InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | PFAM:PF13589 | SEG:seg |
| SUPFAM:SSF55874 | UniParc:UPI00025401C8 | UniProt:M4E1W2 | MapMan:12.5.1.2 | : | : |
Description
AT5G50780 (E=1e-275) | ATP binding
Coordinates
chrA03:-:6882318..6886508
Molecular Weight (calculated)
85341.0 Da
IEP (calculated)
6.718
GRAVY (calculated)
-0.758
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDDAIRVK LENLPTPTSV NGIKPSVIDL CSSDEEDNDG IDASRTVGEK RARRDCDIDT PAKRVAVEEG LGQSSSIVAL QATPCNVVRP SSSAPSCKQF
101: WKAGDYEGTS GGHWEVSAGG FDHVRVHPKF LHSNATSHKW ALGAFAELLD NALDEVHSGA TYVNVNMLTN KKDGSRMLLI EDNGGGMNPE KMRHCMSLGY
201: SAKSKLANTI GQYGNGFKTS TMRLGADVIV FSRCPGKDGD SFTQTIGLLS YTFLKSTGKE DIVVPMLDYE REGSEWSPIV RSSASDWNKN VDTIVQWSPF
301: STEDELLCQF NLMKEHGTRI IIYNLWEDDQ GLLELDFDTD PHDIQLRGVN RDEKSISMAA QYPNSRHFLT YRHSLRSYVS ILYLRVPPEF RIILRRRDVE
401: HHNIVNDMMH TNQITYRPKE GPGGQSNFSN MSAVVTIGFV KDAKHHVDVQ GFNVYHKNRL IKPFWRIWNA AGSQGRGIIG VLEADFVEPA HDKQGFERTT
501: VLSRLETRLL VMQKNYWRLN CHRIGYVSAH GKKSAKDSED RESSPEYAVP TRKRAAAAAS LSFKTPTAAR TVVNRGGKGK GSVRDSNGVG SSEKSGKHGN
601: TSSKFNGRAK ARGAPPALED INSDEDSDYD PPGEENVTEL PEKSFEPPTK PRSTDSRTLS QLEQENETLK ERLNKKEAVY LLLQEELRRE KELRKKLEAE
701: VQRTKDELED VKKEQESLID IFSEDRDRRD KEEEDLRNKL EEASKRIQAL LDEKSRGRR
101: WKAGDYEGTS GGHWEVSAGG FDHVRVHPKF LHSNATSHKW ALGAFAELLD NALDEVHSGA TYVNVNMLTN KKDGSRMLLI EDNGGGMNPE KMRHCMSLGY
201: SAKSKLANTI GQYGNGFKTS TMRLGADVIV FSRCPGKDGD SFTQTIGLLS YTFLKSTGKE DIVVPMLDYE REGSEWSPIV RSSASDWNKN VDTIVQWSPF
301: STEDELLCQF NLMKEHGTRI IIYNLWEDDQ GLLELDFDTD PHDIQLRGVN RDEKSISMAA QYPNSRHFLT YRHSLRSYVS ILYLRVPPEF RIILRRRDVE
401: HHNIVNDMMH TNQITYRPKE GPGGQSNFSN MSAVVTIGFV KDAKHHVDVQ GFNVYHKNRL IKPFWRIWNA AGSQGRGIIG VLEADFVEPA HDKQGFERTT
501: VLSRLETRLL VMQKNYWRLN CHRIGYVSAH GKKSAKDSED RESSPEYAVP TRKRAAAAAS LSFKTPTAAR TVVNRGGKGK GSVRDSNGVG SSEKSGKHGN
601: TSSKFNGRAK ARGAPPALED INSDEDSDYD PPGEENVTEL PEKSFEPPTK PRSTDSRTLS QLEQENETLK ERLNKKEAVY LLLQEELRRE KELRKKLEAE
701: VQRTKDELED VKKEQESLID IFSEDRDRRD KEEEDLRNKL EEASKRIQAL LDEKSRGRR
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.