Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G273000.2 | Wheat | nucleus | 93.75 | 98.51 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 90.33 | 97.08 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 77.59 | 81.84 |
| EES10563 | Sorghum | nucleus | 68.4 | 73.6 |
| Zm00001d004118_P003 | Maize | nucleus | 68.4 | 72.68 |
| GSMUA_Achr11P... | Banana | nucleus | 54.01 | 55.38 |
| CDY34330 | Canola | nucleus | 43.99 | 55.18 |
| CDX71661 | Canola | cytosol | 10.73 | 55.15 |
| CDY03400 | Canola | nucleus | 43.75 | 55.13 |
| Bra019199.1-P | Field mustard | cytosol | 44.1 | 53.74 |
| Bra013851.1-P | Field mustard | nucleus | 43.99 | 53.67 |
| CDY11045 | Canola | nucleus | 43.99 | 53.52 |
| CDX92664 | Canola | nucleus | 43.63 | 53.47 |
| AT4G24970.1 | Thale cress | nucleus | 43.63 | 52.33 |
| CDX84876 | Canola | nucleus | 45.4 | 50.79 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 49.53 | 50.6 |
| Bra022762.1-P | Field mustard | nucleus | 45.28 | 50.59 |
| KRH41106 | Soybean | nucleus | 48.58 | 50.24 |
| CDY45818 | Canola | nucleus | 45.75 | 50.06 |
| Solyc03g097520.2.1 | Tomato | nucleus | 49.17 | 50.0 |
| KRH59787 | Soybean | nucleus | 48.35 | 49.64 |
| AT5G50780.1 | Thale cress | nucleus | 46.11 | 47.74 |
| PGSC0003DMT400088594 | Potato | nucleus | 41.51 | 47.19 |
| Solyc01g009920.1.1 | Tomato | nucleus | 40.8 | 44.59 |
| CDY52039 | Canola | plastid | 35.97 | 44.4 |
| CDX84021 | Canola | plastid | 35.85 | 44.06 |
| AT5G13130.1 | Thale cress | nucleus | 36.67 | 43.93 |
| Solyc10g081760.1.1 | Tomato | nucleus | 41.51 | 41.61 |
| TraesCS1D01G040800.1 | Wheat | cytosol | 29.36 | 41.36 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 29.13 | 40.1 |
| CDX69668 | Canola | nucleus, plastid | 37.74 | 38.46 |
| CDX97228 | Canola | nucleus, plastid | 37.62 | 38.43 |
| TraesCS3D01G202400.1 | Wheat | cytosol | 29.36 | 38.37 |
| Bra016690.1-P | Field mustard | plastid | 36.2 | 37.48 |
| PGSC0003DMT400072308 | Potato | nucleus | 41.63 | 37.47 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 26.18 | 35.69 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 16.75 | 35.24 |
| TraesCS3D01G322900.1 | Wheat | plastid | 28.18 | 33.24 |
| TraesCS7D01G235400.1 | Wheat | cytosol | 27.48 | 22.15 |
| TraesCS7D01G393200.1 | Wheat | cytosol | 14.27 | 15.92 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G272300.3 | EnsemblPlantsGene:TraesCS2D01G272300 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF21 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| TIGR:cd00075 | MapMan:12.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:336959166..336976328
Molecular Weight (calculated)
93750.3 Da
IEP (calculated)
9.204
GRAVY (calculated)
-0.646
Length
848 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPRVVKTEA ADERLTPPAT GAAPAGGGGP RAPVQFIELS SSDSDSDGGV GGSAKRSRSA AGDSAAGKRA RVSAGPVVGV DVPPGFLDPL PAPPQPSRGA
101: TKQFWKAGDY DGNPAGGLEP PPSASGLEHV RVHPKFLHSN ATSHKWALGA LAELLDNSLD EVRNGATFVN IDMLENSKDK TRMLLVEDNG GGMDPDKMRQ
201: CMSLGYSAKS QVANTIGQYG NGFKTSTMRL GADVLVFSRS RGKEGKRPTQ SIGMLSYTFL RSTGKEDIVV PMIDYEKNGL NWTRKLRSTF ADWNTSLQTI
301: ITWSPYGTEA ELLEQFSSIK EQGTRVIIYN LWEDDQGDLE LDFDADVNDI QLRGGNRDEK NIEMAKRFPN SKHFLTYRHS LRSYASILYL RLSDAFQIFL
401: RGKEIEHHNI VTDMMLKKEV TYRPVATNGL PKDSNMVADV TIGFVKDAKF HIDVQGFNVY HRNRLIKPFW RVWTAAGSGG RGVIGVLEAN FIEPAHDKQD
501: FERTTLLARL EARLIQMQKD YWSGNAHRIG YVGARSFRSP ETGRENSPEG SPGAQPSPGH SGKDYPKQRN AGKSYSASSK KSGKTSTPFS CQQAEKSART
601: KRSAGSILHG LPDTSDDSDS EFVNTPSLSS KSHILNAHRK YFQNENTSLA TPASNGTTEK ERSITKSQLA EPNARSNVDG HSIDDHEPVI KQLRDENASL
701: KERLLIVEEA TSQELVMERD KVKSLTERLE DLQRQLDTAN KEQEALIDIF SEERSRRDEE EENLRQKLKR AWSLIGRKHR TPYKSCCWRN QTLAGKVKRC
801: EKLATASLTR VTPVSCFHAL GHGIAVASAT LACVRPMFSP APPLFREW
101: TKQFWKAGDY DGNPAGGLEP PPSASGLEHV RVHPKFLHSN ATSHKWALGA LAELLDNSLD EVRNGATFVN IDMLENSKDK TRMLLVEDNG GGMDPDKMRQ
201: CMSLGYSAKS QVANTIGQYG NGFKTSTMRL GADVLVFSRS RGKEGKRPTQ SIGMLSYTFL RSTGKEDIVV PMIDYEKNGL NWTRKLRSTF ADWNTSLQTI
301: ITWSPYGTEA ELLEQFSSIK EQGTRVIIYN LWEDDQGDLE LDFDADVNDI QLRGGNRDEK NIEMAKRFPN SKHFLTYRHS LRSYASILYL RLSDAFQIFL
401: RGKEIEHHNI VTDMMLKKEV TYRPVATNGL PKDSNMVADV TIGFVKDAKF HIDVQGFNVY HRNRLIKPFW RVWTAAGSGG RGVIGVLEAN FIEPAHDKQD
501: FERTTLLARL EARLIQMQKD YWSGNAHRIG YVGARSFRSP ETGRENSPEG SPGAQPSPGH SGKDYPKQRN AGKSYSASSK KSGKTSTPFS CQQAEKSART
601: KRSAGSILHG LPDTSDDSDS EFVNTPSLSS KSHILNAHRK YFQNENTSLA TPASNGTTEK ERSITKSQLA EPNARSNVDG HSIDDHEPVI KQLRDENASL
701: KERLLIVEEA TSQELVMERD KVKSLTERLE DLQRQLDTAN KEQEALIDIF SEERSRRDEE EENLRQKLKR AWSLIGRKHR TPYKSCCWRN QTLAGKVKRC
801: EKLATASLTR VTPVSCFHAL GHGIAVASAT LACVRPMFSP APPLFREW
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.