Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G329400.1 | Wheat | plastid | 98.19 | 98.47 |
| TraesCS3B01G359600.1 | Wheat | cytosol | 93.32 | 95.31 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 91.79 | 82.71 |
| Os11t0454800-01 | Rice | cytosol | 41.59 | 66.0 |
| EER87847 | Sorghum | plastid | 63.14 | 61.68 |
| KXG33558 | Sorghum | cytosol | 61.89 | 60.38 |
| Zm00001d043191_P005 | Maize | cytosol | 61.06 | 59.49 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 58.55 | 56.13 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 37.97 | 52.2 |
| TraesCS3D01G202400.1 | Wheat | cytosol | 41.86 | 46.38 |
| CDX81912 | Canola | nucleus | 16.13 | 46.22 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 38.94 | 44.44 |
| Solyc06g071580.2.1 | Tomato | cytosol | 36.72 | 43.93 |
| KRH63565 | Soybean | cytosol | 39.36 | 41.13 |
| AT1G19100.1 | Thale cress | nucleus | 37.69 | 40.87 |
| Bra031063.1-P | Field mustard | nucleus | 37.41 | 40.39 |
| CDY21683 | Canola | nucleus | 36.16 | 40.37 |
| KRH03266 | Soybean | mitochondrion | 37.69 | 40.15 |
| Solyc01g099300.2.1 | Tomato | nucleus | 39.64 | 39.97 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 38.94 | 39.49 |
| CDY41018 | Canola | nucleus | 37.13 | 39.26 |
| TraesCS1D01G040800.1 | Wheat | cytosol | 32.55 | 38.87 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 32.55 | 37.99 |
| CDX81913 | Canola | nucleus | 19.47 | 37.33 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 33.24 | 28.18 |
| TraesCS7D01G235400.1 | Wheat | cytosol | 38.39 | 26.24 |
| TraesCS7D01G393200.1 | Wheat | cytosol | 18.22 | 17.24 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G322900.1 | EnsemblPlantsGene:TraesCS3D01G322900 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF45 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| TIGR:cd00075 | MapMan:12.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:435681108..435685298
Molecular Weight (calculated)
78839.6 Da
IEP (calculated)
7.457
GRAVY (calculated)
-0.415
Length
719 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTGNRHTGT TTDPMDTRRD VKPFLAPVTS HSQRGVPGFG VCQAAPTPLG RGARVSAAPQ QAACVVNRAA SLEPEGGCSR DGRLDVEAAG APARGPAPPP
101: LPAARVSRKF WSAGDYDAAG GSPAQPPRNV GSRMCVHPKF LHSNATSHKW PFGAVAELLD NAVDEIKTGA TRIVVDKIVN KRNGSPALLV QDDGGGMDPD
201: SMRRCMSFGF SDKQSGSSIG QYGNGFKTST MRLGADAIVF SRCMKGSGPT QSVGLLSYTF LAETGQKDVV VPMVDYKYDL LTGDAIQYER HGADQFCSNL
301: SVLLKWSPFA TEEDLMGNFS DIGPHGTKII VFNLWSNDDG VLELDFDTKE EDIMISGAPN PAETTNAVKR TNENHLSNQL RYSLRVYASV LYLQLPGYFK
401: IILRGQEVQR HSIATDLIYR QAVSYTPLEF LRKKEGEVVT SIGFLNGAPT ISVHGFNIYH RNRLILPFHR VLSSASSKGR GVAGVLEANF IKPTHDKQDF
501: EKSQLYQKLI IRLKDMTTEY WDLHSHLIGY QKKPRASVSP TPPGMLTASD TIAEPSERNA VGAGLSVAPW RGGTRDHPAS AIPIAFAPPH LSVPAGTSGH
601: APCSMPAAQM VPATDSAETR KRRNEDDVQM DPCKRQAIQS LEVDNQICQR MTERDLNEFE HLKFENQQLH EECLELEVAE KELLLKEQQL RLQIQQAEAQ
701: YKSLLNEYIS ATPVRTHMR
101: LPAARVSRKF WSAGDYDAAG GSPAQPPRNV GSRMCVHPKF LHSNATSHKW PFGAVAELLD NAVDEIKTGA TRIVVDKIVN KRNGSPALLV QDDGGGMDPD
201: SMRRCMSFGF SDKQSGSSIG QYGNGFKTST MRLGADAIVF SRCMKGSGPT QSVGLLSYTF LAETGQKDVV VPMVDYKYDL LTGDAIQYER HGADQFCSNL
301: SVLLKWSPFA TEEDLMGNFS DIGPHGTKII VFNLWSNDDG VLELDFDTKE EDIMISGAPN PAETTNAVKR TNENHLSNQL RYSLRVYASV LYLQLPGYFK
401: IILRGQEVQR HSIATDLIYR QAVSYTPLEF LRKKEGEVVT SIGFLNGAPT ISVHGFNIYH RNRLILPFHR VLSSASSKGR GVAGVLEANF IKPTHDKQDF
501: EKSQLYQKLI IRLKDMTTEY WDLHSHLIGY QKKPRASVSP TPPGMLTASD TIAEPSERNA VGAGLSVAPW RGGTRDHPAS AIPIAFAPPH LSVPAGTSGH
601: APCSMPAAQM VPATDSAETR KRRNEDDVQM DPCKRQAIQS LEVDNQICQR MTERDLNEFE HLKFENQQLH EECLELEVAE KELLLKEQQL RLQIQQAEAQ
701: YKSLLNEYIS ATPVRTHMR
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.