Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G322900.1 | Wheat | plastid | 95.31 | 93.32 |
| TraesCS3A01G329400.1 | Wheat | plastid | 94.46 | 92.75 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 90.91 | 80.2 |
| Os11t0454800-01 | Rice | cytosol | 42.05 | 65.34 |
| EER87847 | Sorghum | plastid | 63.07 | 60.33 |
| KXG33558 | Sorghum | cytosol | 62.22 | 59.43 |
| Zm00001d043191_P005 | Maize | cytosol | 60.94 | 58.13 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 60.09 | 56.4 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 38.64 | 52.01 |
| CDX81912 | Canola | nucleus | 16.48 | 46.22 |
| TraesCS3B01G231900.1 | Wheat | cytosol | 42.47 | 46.07 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 39.63 | 44.29 |
| Solyc06g071580.2.1 | Tomato | cytosol | 37.22 | 43.59 |
| Bra031063.1-P | Field mustard | nucleus | 38.49 | 40.69 |
| KRH63565 | Soybean | cytosol | 39.63 | 40.55 |
| CDY21683 | Canola | nucleus | 37.07 | 40.53 |
| AT1G19100.1 | Thale cress | nucleus | 38.07 | 40.42 |
| KRH03266 | Soybean | mitochondrion | 38.21 | 39.85 |
| Solyc01g099300.2.1 | Tomato | nucleus | 40.2 | 39.69 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 39.91 | 39.63 |
| TraesCS1B01G051700.2 | Wheat | cytosol | 33.24 | 38.94 |
| CDY41018 | Canola | nucleus | 37.5 | 38.82 |
| TraesCS7B01G249900.1 | Wheat | cytosol | 33.66 | 38.47 |
| CDX81913 | Canola | nucleus | 20.17 | 37.87 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 33.66 | 30.04 |
| TraesCS7B01G133500.2 | Wheat | cytosol | 38.35 | 24.64 |
| TraesCS7B01G299600.1 | Wheat | cytosol | 18.32 | 16.97 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G359600.1 | EnsemblPlantsGene:TraesCS3B01G359600 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF45 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| TIGR:cd00075 | MapMan:12.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:571762662..571766849
Molecular Weight (calculated)
77279.8 Da
IEP (calculated)
7.273
GRAVY (calculated)
-0.422
Length
704 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTGNRHTGT TTDPMDTRRD VKPFLAPVTS QRGVPGFGVC QAAPTPLGRG ARVSAAPQQA ASLEPEGGFS RDGRLDVEAA GAPARRPAPP PLPAARVSRK
101: FWSAGDYDAA GGSPAQPPRN VGSRMCVHPK FLHSNATSHK WPFGAVAELL DNAVDEIKTG ATRIMVDKIV NKRNGSPALL VQDDGGGMDP DSMRRCMSFG
201: FSDKQSGSSI GQYGNGFKTS TMRLGADAIV FSRCMKGSGP TQSVGLLSYT FLAETGQKDV VVPMVDYKYD LLTGDAIQYE RHGADQFFSN LSVLLKWSPF
301: ATEEELMGNF SDIGPHGTKI IVFNLWSNDD GVLELDFDNK EEDIMISGAP NPAETTNAVK RTNENHLSNQ LRYSLRVYAS VLYLQLPGYF KIILRGQEVQ
401: RHSIATDLIY RQAVAYTPLE FLRKKEGEVV TSIGFLNGAP TISVHGFNIY HRNRLILPFH RVLSSASSKG RSVAGVLEAN FIKPTHDKQD FEKSQLYQKL
501: IIRLKDMTTE YWDLHSHLIG YQKKPCASIS PTPPGMLTGS DTVAEPSERN AAGAVLSMAP WRGGTRDNPS CAIPIAFAPP HLSVPAGTSV PGAQMAPDTD
601: STETRKRRNE DAVQMDPCKR QAIQSLEVDN QVCQHMTEGD LNEYTHLKVE NQQLHEECLE LEVAGKELLL KEQQLRLQIQ QAEAQYKSLL NEYISATPVR
701: TRMQ
101: FWSAGDYDAA GGSPAQPPRN VGSRMCVHPK FLHSNATSHK WPFGAVAELL DNAVDEIKTG ATRIMVDKIV NKRNGSPALL VQDDGGGMDP DSMRRCMSFG
201: FSDKQSGSSI GQYGNGFKTS TMRLGADAIV FSRCMKGSGP TQSVGLLSYT FLAETGQKDV VVPMVDYKYD LLTGDAIQYE RHGADQFFSN LSVLLKWSPF
301: ATEEELMGNF SDIGPHGTKI IVFNLWSNDD GVLELDFDNK EEDIMISGAP NPAETTNAVK RTNENHLSNQ LRYSLRVYAS VLYLQLPGYF KIILRGQEVQ
401: RHSIATDLIY RQAVAYTPLE FLRKKEGEVV TSIGFLNGAP TISVHGFNIY HRNRLILPFH RVLSSASSKG RSVAGVLEAN FIKPTHDKQD FEKSQLYQKL
501: IIRLKDMTTE YWDLHSHLIG YQKKPCASIS PTPPGMLTGS DTVAEPSERN AAGAVLSMAP WRGGTRDNPS CAIPIAFAPP HLSVPAGTSV PGAQMAPDTD
601: STETRKRRNE DAVQMDPCKR QAIQSLEVDN QVCQHMTEGD LNEYTHLKVE NQQLHEECLE LEVAGKELLL KEQQLRLQIQ QAEAQYKSLL NEYISATPVR
701: TRMQ
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.