Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043191_P005 | Maize | cytosol | 74.8 | 76.02 |
| KXG33558 | Sorghum | cytosol | 74.13 | 75.44 |
| TraesCS3B01G359600.1 | Wheat | cytosol | 56.4 | 60.09 |
| TraesCS3A01G329400.1 | Wheat | plastid | 56.27 | 58.86 |
| TraesCS3D01G322900.1 | Wheat | plastid | 56.13 | 58.55 |
| Os11t0454800-01 | Rice | cytosol | 34.67 | 57.4 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 56.53 | 53.13 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 36.27 | 52.01 |
| CDX81912 | Canola | nucleus | 14.8 | 44.22 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 36.93 | 43.97 |
| Solyc06g071580.2.1 | Tomato | cytosol | 34.93 | 43.59 |
| Zm00001d044506_P006 | Maize | cytosol | 39.33 | 42.08 |
| AT1G19100.1 | Thale cress | nucleus | 36.0 | 40.72 |
| Solyc01g099300.2.1 | Tomato | nucleus | 38.53 | 40.53 |
| Bra031063.1-P | Field mustard | nucleus | 35.73 | 40.24 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 37.73 | 39.92 |
| CDY21683 | Canola | nucleus | 34.13 | 39.75 |
| KRH63565 | Soybean | cytosol | 36.0 | 39.24 |
| Zm00001d024625_P002 | Maize | cytosol | 30.67 | 38.98 |
| CDY41018 | Canola | nucleus | 35.33 | 38.97 |
| CDX81913 | Canola | nucleus | 19.33 | 38.67 |
| KRH03266 | Soybean | mitochondrion | 34.27 | 38.07 |
| Zm00001d053269_P001 | Maize | cytosol | 10.53 | 30.27 |
| Zm00001d004118_P003 | Maize | nucleus | 30.27 | 28.45 |
| Zm00001d045978_P002 | Maize | cytosol | 34.93 | 26.82 |
| Zm00001d053268_P001 | Maize | cytosol | 15.2 | 21.67 |
| Zm00001d046722_P007 | Maize | cytosol | 16.27 | 14.56 |
Protein Annotations
| EnsemblPlants:Zm00001d012575_P001 | EnsemblPlants:Zm00001d012575_T001 | EnsemblPlantsGene:Zm00001d012575 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
| InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF45 | PFAM:PF13589 | ProteinID:AQK99900.1 |
| SEG:seg | SUPFAM:SSF55874 | UniParc:UPI000222093C | UniProt:K7V837 | MapMan:12.5.1.2 | : |
Description
Protein MICRORCHIDIA 6
Coordinates
chr8:+:176835289..176839722
Molecular Weight (calculated)
83941.0 Da
IEP (calculated)
8.312
GRAVY (calculated)
-0.446
Length
750 amino acids
Sequence
(BLAST)
(BLAST)
001: MCMSSLIAPT RPRRLSFENS KRLEEASTDY MDAERDIKPF VFPTVPTTIQ RNFHGPGARQ PTARPLERCG TRVLPQTHRP CSAPRLSRKF WGAGDYDAVA
101: GRSAPQPPSL QNRMCVHPEF LHSNATSHKW PFGVCLTFFP IAIAVAELLD NAVDEIETGG ATTILLDKLI DKRNGSPALL IQDDGGGMDP DSLRRCMSFG
201: FSEKQSGSSI GQYGNGFKTS TMRLGADAIV FSRCCTRSSG PTQSIGLLSY TFLVETGHTN VVVPMRLERH GSKQFFSNLS ALLKWSPFAT EEELMQNFCD
301: IGPHGTKIIV FNLWSNDDGN LELDFDTNPE DIMISGAPNP EQISNSVRRA NENHLANRLR YSLRVYASVL YLQLPDYFRI MLRGREVERH HIASDLIYPE
401: RISYRPQSCG IIREAEVLTT IGFLKGAPTI SVHGFNIYHK NRLILPFHRV LSTASSKGRS VSGVLEVDFI KPTHDKQDFE KSQLFQRLMN RLKEMTNEYC
501: TDAYFASNVT TQMSRSFHRD LYSNKIGYVK VPRVRAAPTP APPVMLAIEN GPAEPSERSA PAPTQPLRWQ HGNSSCVNAV PIAMAPPAFH PAPVKTETDA
601: PGAPTGYAYS YSPSWPSVQA MQIEKIKEEP SMAAPGTDWV ETRKRTNDDG ATTVALFKRR KAPQELAGSG SRSATDQVSR YVGEGELNEF CFLKMENRML
701: RGECSEFEMA EKELRVKEQN LRLEIEMAQE QFKRLLGEYV SFSSMPTRKP
101: GRSAPQPPSL QNRMCVHPEF LHSNATSHKW PFGVCLTFFP IAIAVAELLD NAVDEIETGG ATTILLDKLI DKRNGSPALL IQDDGGGMDP DSLRRCMSFG
201: FSEKQSGSSI GQYGNGFKTS TMRLGADAIV FSRCCTRSSG PTQSIGLLSY TFLVETGHTN VVVPMRLERH GSKQFFSNLS ALLKWSPFAT EEELMQNFCD
301: IGPHGTKIIV FNLWSNDDGN LELDFDTNPE DIMISGAPNP EQISNSVRRA NENHLANRLR YSLRVYASVL YLQLPDYFRI MLRGREVERH HIASDLIYPE
401: RISYRPQSCG IIREAEVLTT IGFLKGAPTI SVHGFNIYHK NRLILPFHRV LSTASSKGRS VSGVLEVDFI KPTHDKQDFE KSQLFQRLMN RLKEMTNEYC
501: TDAYFASNVT TQMSRSFHRD LYSNKIGYVK VPRVRAAPTP APPVMLAIEN GPAEPSERSA PAPTQPLRWQ HGNSSCVNAV PIAMAPPAFH PAPVKTETDA
601: PGAPTGYAYS YSPSWPSVQA MQIEKIKEEP SMAAPGTDWV ETRKRTNDDG ATTVALFKRR KAPQELAGSG SRSATDQVSR YVGEGELNEF CFLKMENRML
701: RGECSEFEMA EKELRVKEQN LRLEIEMAQE QFKRLLGEYV SFSSMPTRKP
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.