Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU76414 | Sorghum | cytosol | 80.14 | 82.59 |
| Solyc06g071580.2.1 | Tomato | cytosol | 26.92 | 43.76 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 27.53 | 42.7 |
| CDX81912 | Canola | nucleus | 10.85 | 42.23 |
| HORVU7Hr1G048310.12 | Barley | cytosol | 37.67 | 42.01 |
| Zm00001d044506_P006 | Maize | cytosol | 29.07 | 40.51 |
| TraesCS7A01G235300.2 | Wheat | nucleus | 40.33 | 39.28 |
| Solyc01g099300.2.1 | Tomato | nucleus | 28.45 | 38.99 |
| AT1G19100.1 | Thale cress | nucleus | 26.1 | 38.46 |
| KRH63565 | Soybean | cytosol | 26.92 | 38.23 |
| Zm00001d024625_P002 | Maize | cytosol | 22.93 | 37.97 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 27.43 | 37.8 |
| Bra031063.1-P | Field mustard | nucleus | 25.69 | 37.69 |
| KRH03266 | Soybean | mitochondrion | 26.0 | 37.63 |
| CDY21683 | Canola | nucleus | 24.36 | 36.96 |
| TraesCS7D01G235400.1 | Wheat | cytosol | 39.3 | 36.5 |
| CDY41018 | Canola | nucleus | 25.18 | 36.18 |
| Zm00001d043191_P005 | Maize | cytosol | 27.23 | 36.04 |
| TraesCS7B01G133500.2 | Wheat | cytosol | 40.43 | 36.04 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 26.82 | 34.93 |
| CDX81913 | Canola | nucleus | 13.31 | 34.67 |
| Zm00001d053269_P001 | Maize | cytosol | 9.11 | 34.1 |
| Zm00001d004118_P003 | Maize | nucleus | 24.26 | 29.7 |
| Zm00001d053268_P001 | Maize | cytosol | 10.54 | 19.58 |
| Zm00001d046722_P007 | Maize | cytosol | 13.0 | 15.16 |
Protein Annotations
| EnsemblPlants:Zm00001d045978_P002 | EnsemblPlants:Zm00001d045978_T002 | EnsemblPlantsGene:Zm00001d045978 | EntrezGene:103638395 | Gene3D:3.30.565.10 | InterPro:HATPase_C |
| InterPro:HATPase_C_sf | InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | PFAM:PF13589 |
| ProteinID:AQL03571.1 | SEG:seg | SUPFAM:SSF55874 | UniParc:UPI000843D87A | UniProt:A0A1D6P0C0 | MapMan:12.5.1.2 |
Description
Protein MICRORCHIDIA 6
Coordinates
chr9:-:51358329..51394263
Molecular Weight (calculated)
109221.0 Da
IEP (calculated)
5.983
GRAVY (calculated)
-0.475
Length
977 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVDIVDLSS DDDEVAVTEE HSVDGKGVYA KANFFDLTID DGILEGEHIA YEQEQGDSAQ GTSFYKQEFI ADDGQAEAAQ CIVTLELQNL GADGGCYASQ
101: CTETLLVQQL RRNDGQNDAA HSTGTLPIQE LRTDGGQHDA AQCTTSLHMQ ELRATDVQGD AACFTPTLQR QEHTAGNEQG DTVQYTTTQQ GQESIADDTR
201: GDFTHCTTAL QWQGSHKAQC TTTLLRQEFL AAGDRMQDAA LLRNSAEATT SLTSTQQGRH MRTELFNVST ATPFPRQFWK AGEKAGDYGL ASQADLNNDH
301: NRLQIHPKFL HSNATSHKWP FGAIAELLDN AIDEVSSGAT FVKIDKMKHS PKGDYSLVIE DNGGGMSPKS LRQCMSFGFS QKSTTSSIGQ YGNGFKTSTM
401: RLGADAIVFT CTKDDRRLTR SIGLLSYTFL MRSNCNDIFV PVVDYELDAL SSTFKRKMNC GEKHFLSNLF TILKWSPFST EDELLNQFSN MECHGTKIIV
501: FNLWLNDALE MELDFITDKE DILVSGAPEI RAGRNTVESL TQMHVANRFR YSLRVYASIL YLHVPENFQI ILCGRAVEPH YVVNDLIYRE CIIYRPHVQV
601: TTEVDVITTI GYLKGAPRLD IYGFSVYHKN RLILVGLSES EKRKFWEDLD GMVRAVPTNE KLFIRGDLNG HVGSTNAGYE LAHGGFEYGS RNQGEGILDF
701: AIAYNLPYWP AGSCSGRRRG IAGVLEANFI RPTHDKQDFE RTGLFQRLET RLKDMAKEYW TYHCHMVGYT RVMKKPPPAH YVSTIAEKGD DNLAAQSTTK
801: TYGYNSRARV PVALQPCSNA YNTQDPMHAD VGVVMDQMNY GACPSMTINV GTTLHSLRYA PQQSQSELCK RRKSSEIHWR SQKKQNTNIY SDKPESDSGT
901: EMAEFRVVLD SSTMLKAECS ELEAAGKQLA SKADKLRIEL DVWQRMYQGL SDKLRSYDGL QRLRCSRHCS SSSIGFI
101: CTETLLVQQL RRNDGQNDAA HSTGTLPIQE LRTDGGQHDA AQCTTSLHMQ ELRATDVQGD AACFTPTLQR QEHTAGNEQG DTVQYTTTQQ GQESIADDTR
201: GDFTHCTTAL QWQGSHKAQC TTTLLRQEFL AAGDRMQDAA LLRNSAEATT SLTSTQQGRH MRTELFNVST ATPFPRQFWK AGEKAGDYGL ASQADLNNDH
301: NRLQIHPKFL HSNATSHKWP FGAIAELLDN AIDEVSSGAT FVKIDKMKHS PKGDYSLVIE DNGGGMSPKS LRQCMSFGFS QKSTTSSIGQ YGNGFKTSTM
401: RLGADAIVFT CTKDDRRLTR SIGLLSYTFL MRSNCNDIFV PVVDYELDAL SSTFKRKMNC GEKHFLSNLF TILKWSPFST EDELLNQFSN MECHGTKIIV
501: FNLWLNDALE MELDFITDKE DILVSGAPEI RAGRNTVESL TQMHVANRFR YSLRVYASIL YLHVPENFQI ILCGRAVEPH YVVNDLIYRE CIIYRPHVQV
601: TTEVDVITTI GYLKGAPRLD IYGFSVYHKN RLILVGLSES EKRKFWEDLD GMVRAVPTNE KLFIRGDLNG HVGSTNAGYE LAHGGFEYGS RNQGEGILDF
701: AIAYNLPYWP AGSCSGRRRG IAGVLEANFI RPTHDKQDFE RTGLFQRLET RLKDMAKEYW TYHCHMVGYT RVMKKPPPAH YVSTIAEKGD DNLAAQSTTK
801: TYGYNSRARV PVALQPCSNA YNTQDPMHAD VGVVMDQMNY GACPSMTINV GTTLHSLRYA PQQSQSELCK RRKSSEIHWR SQKKQNTNIY SDKPESDSGT
901: EMAEFRVVLD SSTMLKAECS ELEAAGKQLA SKADKLRIEL DVWQRMYQGL SDKLRSYDGL QRLRCSRHCS SSSIGFI
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.