Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G235300.2 | Wheat | nucleus | 84.59 | 73.88 |
| TraesCS7B01G133500.2 | Wheat | cytosol | 88.7 | 70.89 |
| TraesCS7D01G235400.1 | Wheat | cytosol | 84.59 | 70.44 |
| CDX81912 | Canola | nucleus | 13.24 | 46.22 |
| Solyc06g071580.2.1 | Tomato | cytosol | 31.39 | 45.76 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 32.42 | 45.08 |
| HORVU3Hr1G046280.3 | Barley | cytosol | 30.94 | 41.76 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 33.68 | 41.61 |
| Solyc01g099300.2.1 | Tomato | nucleus | 33.68 | 41.37 |
| AT1G19100.1 | Thale cress | nucleus | 31.28 | 41.33 |
| Bra031063.1-P | Field mustard | nucleus | 30.71 | 40.39 |
| CDY21683 | Canola | nucleus | 29.45 | 40.06 |
| KRH63565 | Soybean | cytosol | 31.16 | 39.68 |
| KRH03266 | Soybean | mitochondrion | 30.14 | 39.11 |
| OQU76414 | Sorghum | cytosol | 42.12 | 38.92 |
| CDY41018 | Canola | nucleus | 30.02 | 38.68 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 26.6 | 38.45 |
| Zm00001d045978_P002 | Maize | cytosol | 42.01 | 37.67 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 26.94 | 37.58 |
| CDX81913 | Canola | nucleus | 15.64 | 36.53 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 31.51 | 34.59 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 26.14 | 28.48 |
| HORVU1Hr1G080470.5 | Barley | cytosol | 12.79 | 14.53 |
| HORVU7Hr1G093640.3 | Barley | cytosol | 5.48 | 13.75 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G048310.12 | EnsemblPlantsGene:HORVU7Hr1G048310 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI000B462089 | UniProt:A0A287WEE2 | MapMan:12.5.1.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:164848542..164858691
Molecular Weight (calculated)
96525.3 Da
IEP (calculated)
5.388
GRAVY (calculated)
-0.407
Length
876 amino acids
Sequence
(BLAST)
(BLAST)
001: AGDCDEEAMQ PGKQDFAAAV DCAEETMQYE NAAEAGPSSF TEQGVVAGDC GEEAMQPGKQ DFAAAVDCAE EAMQSENAAE AGTSSFTEQG VVAGYCSEEA
101: MQYGNQDFVA AVDCAEEAMQ SENAAVAGPL SFTGQGFAAG VCGEEAMQSG KQDFIAAVDC SEEAMQSENA VEAAPSSFTD GVAAGDFAEE AMRYNHEDKA
201: AECSPMTGQA GASSLSLTEQ DATTSSLRTV QQSHKRDALL GSPPISTAAP FPRQFWKAGE YKVAARASIN SGQNCLRINP KFLHSNATSH KWVFGAIAEL
301: LDNAVDEVQN GATYVKIDKI KHSPVGEYSL MIQDDGGGMS PEYIRHCLSF GFSNKCTNSS IGQYGNGFKT STMRLGADAI IFSCNKANRL TRSVGLLSYT
401: FLKGTGCDDI LVPVVDYEFD PSSCNFKRIM DRGEQHFFSN LSTLLRWSPF STEDDLLNQF EDMGCHGTKI VVFNLWLNDA NEMELDFTTD GEDIMMSGAP
501: KIPEERAKVK RLNHMHIANR FRYSLRVYAS ILYLRLPEHF EVILCGRTVE PHHIVKDLIY RECIKYRPQV GVSVQVDVVT SIGFLKGAPH LDIYGFNIYH
601: RNRLILPFWA AGSERGRGRG IAGVLEANFI RPTHDKQDFE KTELFQRLET RLKDMTMEYW KHHAHLIGYR QITKSPPAYY ASIAATHDNT PVAQAAATIY
701: VRNSRAKASG VLDSHFNGGN SLNPLHVGAL RDQMDYGICS LARRNMRTSL YMPSTPQQTE PCKRRNSGSM IETRAQKRHN TNGNADHLGS VNVVEFGDER
801: SRVLICQKMV LKAECSELEA AAQNLQSKAD RLRGELREWQ RRQRSLTDEL EFYDGLSAIR SRIPRASTSS MGVGWI
101: MQYGNQDFVA AVDCAEEAMQ SENAAVAGPL SFTGQGFAAG VCGEEAMQSG KQDFIAAVDC SEEAMQSENA VEAAPSSFTD GVAAGDFAEE AMRYNHEDKA
201: AECSPMTGQA GASSLSLTEQ DATTSSLRTV QQSHKRDALL GSPPISTAAP FPRQFWKAGE YKVAARASIN SGQNCLRINP KFLHSNATSH KWVFGAIAEL
301: LDNAVDEVQN GATYVKIDKI KHSPVGEYSL MIQDDGGGMS PEYIRHCLSF GFSNKCTNSS IGQYGNGFKT STMRLGADAI IFSCNKANRL TRSVGLLSYT
401: FLKGTGCDDI LVPVVDYEFD PSSCNFKRIM DRGEQHFFSN LSTLLRWSPF STEDDLLNQF EDMGCHGTKI VVFNLWLNDA NEMELDFTTD GEDIMMSGAP
501: KIPEERAKVK RLNHMHIANR FRYSLRVYAS ILYLRLPEHF EVILCGRTVE PHHIVKDLIY RECIKYRPQV GVSVQVDVVT SIGFLKGAPH LDIYGFNIYH
601: RNRLILPFWA AGSERGRGRG IAGVLEANFI RPTHDKQDFE KTELFQRLET RLKDMTMEYW KHHAHLIGYR QITKSPPAYY ASIAATHDNT PVAQAAATIY
701: VRNSRAKASG VLDSHFNGGN SLNPLHVGAL RDQMDYGICS LARRNMRTSL YMPSTPQQTE PCKRRNSGSM IETRAQKRHN TNGNADHLGS VNVVEFGDER
801: SRVLICQKMV LKAECSELEA AAQNLQSKAD RLRGELREWQ RRQRSLTDEL EFYDGLSAIR SRIPRASTSS MGVGWI
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.