Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045978_P002 | Maize | cytosol | 82.59 | 80.14 |
| Solyc06g071580.2.1 | Tomato | cytosol | 27.74 | 43.76 |
| EES00907 | Sorghum | cytosol | 31.12 | 43.64 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 28.9 | 43.49 |
| CDX81912 | Canola | nucleus | 11.5 | 43.43 |
| HORVU7Hr1G048310.12 | Barley | cytosol | 38.92 | 42.12 |
| AT1G19100.1 | Thale cress | nucleus | 27.64 | 39.52 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 29.32 | 39.21 |
| Bra031063.1-P | Field mustard | nucleus | 27.53 | 39.19 |
| TraesCS7A01G235300.2 | Wheat | nucleus | 41.46 | 39.18 |
| Solyc01g099300.2.1 | Tomato | nucleus | 29.01 | 38.57 |
| KRH63565 | Soybean | cytosol | 27.74 | 38.23 |
| KRH03266 | Soybean | mitochondrion | 27.22 | 38.22 |
| CDY21683 | Canola | nucleus | 25.95 | 38.2 |
| KXG24418 | Sorghum | cytosol | 23.84 | 37.73 |
| EER87847 | Sorghum | plastid | 28.9 | 37.23 |
| CDY41018 | Canola | nucleus | 26.48 | 36.91 |
| TraesCS7D01G235400.1 | Wheat | cytosol | 40.82 | 36.79 |
| KXG33558 | Sorghum | cytosol | 28.48 | 36.63 |
| TraesCS7B01G133500.2 | Wheat | cytosol | 41.67 | 36.04 |
| CDX81913 | Canola | nucleus | 14.03 | 35.47 |
| EES10563 | Sorghum | nucleus | 25.21 | 30.33 |
| KXG30181 | Sorghum | nucleus | 24.89 | 29.32 |
| KXG20380 | Sorghum | cytosol | 13.29 | 15.97 |
Protein Annotations
| EnsemblPlants:OQU76414 | EnsemblPlantsGene:SORBI_3010G143600 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | PFAM:PF13589 | ProteinID:KXG20019.1 | ProteinID:OQU76414 |
| ProteinID:OQU76414.1 | SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0007F2321C | UniProt:A0A194YJ71 | MapMan:12.5.1.2 |
Description
hypothetical protein
Coordinates
chr10:-:38101564..38120023
Molecular Weight (calculated)
105813.0 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.518
Length
948 amino acids
Sequence
(BLAST)
(BLAST)
001: MIVDIVVLSS DDDEVVVREE PNVHGKGVHV KADVFDLTSD NDIFEGGHIA YEQGGSAQGT SFLKQEFTAD DGQAEAAQCT VTLQMQNLGA DDGQGDASQC
101: TEILKVQNLR ADDGQCDAVH STGTLLMREL RTDDGQHDAA QCTASLHMQE LRADDVQGDA AQCVTTLQMQ ELSADDGQCD TAECITLQRQ EPRATLQTQT
201: HDGQGDATWF TPTLQRQEHT ADIEQGDTVQ CTTPRQRQES IADDAQGDFN HCTTALQWQG SHKAQCTTTL LRQEFLAAGG SMQEAALLRN SAEATTSLTS
301: TRQGRHTITG LFNVSTATPF PRQFWKAGEK AGDYGLASQA ALNNGHNRLQ IHPKFLHSNA TSHKWPFGAI AELLDNAIDE VSSGATFVKI DKMKHSPDGD
401: YSLVIEDNGG GMSPKSLRHC MSFGFSQKCT TSSIGQYGNG FKTSTMRLGA DAIVFTCTKD DRRMTRSIGL LSYTFLMRSN CNDIFVPAVD YELDASSSTF
501: KRKMNCGEKH FLSNLSILLK WSPFSTENEL LNQFSNMECH GTKIIVFNLW LNDALEMELD FITDKEDILI SGAPEIRAGR NTVESLKQMH VANRFRYSLR
601: VYASILYLHV PENFQIILCG RAVEPHYVVN DLMYRECIIY RPHVEVTTEV DVITTIGYLK GAPRLDIYGF SVYHKNRLIL PYWQAGSCSR RRRGIAGVLE
701: ANFIRPTHDK QDFERTGLFQ RLETRLKDMA TEYWTYHCHM VGYTRVMKKP PPAHYVSTTA EDGDDNLAAQ STTKTYGYNS RARVSVALQP CSNVHNAQDP
801: MHADVGALMD QDACPSTTIN VGTTLHSQRY APQQSQAEPC KRRKSSSEIH WRSQKRQNTN VYSDKPGSNN GTEMAEFRVV LDSNTMLKAE CSKLEEAGKQ
901: LACKADKLRK ELDVWRQMFQ NLSGDLRDLR FHEGLGRRRH CNSSIGFI
101: TEILKVQNLR ADDGQCDAVH STGTLLMREL RTDDGQHDAA QCTASLHMQE LRADDVQGDA AQCVTTLQMQ ELSADDGQCD TAECITLQRQ EPRATLQTQT
201: HDGQGDATWF TPTLQRQEHT ADIEQGDTVQ CTTPRQRQES IADDAQGDFN HCTTALQWQG SHKAQCTTTL LRQEFLAAGG SMQEAALLRN SAEATTSLTS
301: TRQGRHTITG LFNVSTATPF PRQFWKAGEK AGDYGLASQA ALNNGHNRLQ IHPKFLHSNA TSHKWPFGAI AELLDNAIDE VSSGATFVKI DKMKHSPDGD
401: YSLVIEDNGG GMSPKSLRHC MSFGFSQKCT TSSIGQYGNG FKTSTMRLGA DAIVFTCTKD DRRMTRSIGL LSYTFLMRSN CNDIFVPAVD YELDASSSTF
501: KRKMNCGEKH FLSNLSILLK WSPFSTENEL LNQFSNMECH GTKIIVFNLW LNDALEMELD FITDKEDILI SGAPEIRAGR NTVESLKQMH VANRFRYSLR
601: VYASILYLHV PENFQIILCG RAVEPHYVVN DLMYRECIIY RPHVEVTTEV DVITTIGYLK GAPRLDIYGF SVYHKNRLIL PYWQAGSCSR RRRGIAGVLE
701: ANFIRPTHDK QDFERTGLFQ RLETRLKDMA TEYWTYHCHM VGYTRVMKKP PPAHYVSTTA EDGDDNLAAQ STTKTYGYNS RARVSVALQP CSNVHNAQDP
801: MHADVGALMD QDACPSTTIN VGTTLHSQRY APQQSQAEPC KRRKSSSEIH WRSQKRQNTN VYSDKPGSNN GTEMAEFRVV LDSNTMLKAE CSKLEEAGKQ
901: LACKADKLRK ELDVWRQMFQ NLSGDLRDLR FHEGLGRRRH CNSSIGFI
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.