CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63565	Soybean	cytosol	55.26	54.22
CDX81912	Canola	nucleus	20.15	54.18
VIT_17s0000g08750.t01	Wine grape	nucleus	53.78	51.2
GSMUA_Achr9P25210_001	Banana	cytosol	39.41	50.86
Solyc06g071580.2.1	Tomato	cytosol	45.19	50.75
AT1G19100.1	Thale cress	nucleus	47.56	48.42
Bra031063.1-P	Field mustard	nucleus	46.67	47.3
Os01t0549200-02	Rice	cytosol, peroxisome, plastid	25.33	47.11
CDY21683	Canola	nucleus	44.74	46.89
CDY41018	Canola	nucleus	46.22	45.88
TraesCS3B01G231900.1	Wheat	cytosol	42.96	44.68
TraesCS3A01G192600.2	Wheat	cytosol	42.81	44.53
TraesCS3D01G202400.1	Wheat	cytosol	42.81	44.53
HORVU3Hr1G046280.3	Barley	cytosol	42.67	44.38
Os11t0454800-01	Rice	cytosol	29.19	43.49
GSMUA_Achr4P13250_001	Banana	cytosol	39.85	43.46
CDX81913	Canola	nucleus	24.0	43.2
Solyc01g099300.2.1	Tomato	nucleus	45.33	42.92
EES00907	Sorghum	cytosol	42.67	42.6
Zm00001d044506_P006	Maize	cytosol	41.78	40.23
KRH08132	Soybean	cytosol	37.33	40.0
TraesCS3B01G359600.1	Wheat	cytosol	39.85	38.21
TraesCS3A01G329400.1	Wheat	plastid	40.15	37.8
TraesCS3D01G322900.1	Wheat	plastid	40.15	37.69
EER87847	Sorghum	plastid	40.89	37.5
KRH69835	Soybean	cytosol	36.3	37.18
Zm00001d043191_P005	Maize	cytosol	40.15	36.72
KXG33558	Sorghum	cytosol	39.85	36.5
Zm00001d012575_P001	Maize	mitochondrion, nucleus	38.07	34.27
HORVU3Hr1G078330.4	Barley	endoplasmic reticulum, plasma membrane	40.3	34.09
HORVU7Hr1G048310.12	Barley	cytosol	39.11	30.14
KRH41106	Soybean	nucleus	34.52	28.41
KRH59787	Soybean	nucleus	33.63	27.48
OQU76414	Sorghum	cytosol	38.22	27.22
TraesCS7A01G235300.2	Wheat	nucleus	39.7	26.72
Zm00001d045978_P002	Maize	cytosol	37.63	26.0
TraesCS7D01G235400.1	Wheat	cytosol	39.26	25.19
TraesCS7B01G133500.2	Wheat	cytosol	38.52	23.72
KRH76501	Soybean	cytosol	19.11	18.78

Protein Annotations

EMBL:ACUP02010342	EnsemblPlants:KRH03266	EnsemblPlantsGene:GLYMA_17G087900	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:IPR036890	ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF44	PFAM:PF13589	ProteinID:KRH03266
ProteinID:KRH03266.1	SEG:seg	SUPFAM:SSF55874	UniParc:UPI00029532C5	UniProt:K7MKP6	MapMan:12.5.1.2

Description

hypothetical protein

Coordinates

chr17:-:6811120..6824305

Molecular Weight (calculated)

76842.6 Da

IEP (calculated)

6.914

GRAVY (calculated)

-0.431

Length

675 amino acids

Sequence
(BLAST)

001: MTCSRRFRNG RYKTTAQKGG EWTLHMEICG EAIQGTKMSS IEIVDLCNSD DDEVENVGSE PAKKLIEIKK ETCQVTENII QVASEGNRSS SALSTCHSYS
101: TRQMEEMVAP LYVDVDDTTG LSLPPFCRNF WRAGYHHDNN GLSSKLNFPN TGNYLHVHPF FLHSNATSHK WVFGAIAELI DNAVDEIQNG ATFVFVDKIL
201: NPKDGSPALL IRDDGGGMDP EAMRQCMSFG FSNKSKIAIG QYGNGFKTGS MRLGADVIVF SRHQNNMKLT QSIGLLSYTY LMQTQQDRVV VPMVNYKFDT
301: STGYLERLND GEHFRSNLSI LLHWSPYLSE EELLKLFDDI GNHGTKIIIF NLWFNDDGNL ELDFNSDPED IHIVGDIKKI DTHSASKIVN EGHIANRFHY
401: SLHAYLSILY LRIPESFRMI LRGQVVKLHN IADDLKYTEF VLYRPQCGSS KEGVSVTTIG FVKEAPKGNI HGFNVYHKNR LILPFWKVVN YTNTRGRGVV
501: GILQADYLEP THNKQDFERT SLFQKLELRL KQMTWEYWDY HCHLIGYCKR STGDPGAPLN KRKTHGSIDL HKMKRQAMQE NVTVAGCDQN VLTTASPTDQ
601: TVDQRIINLM EVQKKLLKEC LKYEKAEEEL NLKVTQLRRK TQEAKHEYDT LMAEVKSLGL YLWEENGSVA VPLVF

Best Arabidopsis Sequence Match ( AT1G19100.1 )
(BLAST)

001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT

Arabidopsis Description

MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.