Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33558 | Sorghum | cytosol | 79.21 | 79.1 |
| Os11t0454800-01 | Rice | cytosol | 39.27 | 63.8 |
| TraesCS3D01G322900.1 | Wheat | plastid | 61.68 | 63.14 |
| TraesCS3B01G359600.1 | Wheat | cytosol | 60.33 | 63.07 |
| TraesCS3A01G329400.1 | Wheat | plastid | 61.41 | 63.04 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 61.55 | 56.77 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 38.72 | 54.49 |
| EES00907 | Sorghum | cytosol | 43.34 | 47.19 |
| CDX81912 | Canola | nucleus | 15.62 | 45.82 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 37.91 | 44.29 |
| Solyc06g071580.2.1 | Tomato | cytosol | 35.19 | 43.09 |
| AT1G19100.1 | Thale cress | nucleus | 37.64 | 41.78 |
| Bra031063.1-P | Field mustard | nucleus | 37.23 | 41.14 |
| Solyc01g099300.2.1 | Tomato | nucleus | 39.81 | 41.09 |
| KRH03266 | Soybean | mitochondrion | 37.5 | 40.89 |
| KRH63565 | Soybean | cytosol | 38.18 | 40.84 |
| CDY21683 | Canola | nucleus | 35.46 | 40.53 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 38.45 | 39.92 |
| CDY41018 | Canola | nucleus | 36.14 | 39.12 |
| KXG24418 | Sorghum | cytosol | 31.79 | 39.07 |
| CDX81913 | Canola | nucleus | 19.7 | 38.67 |
| EES10563 | Sorghum | nucleus | 32.07 | 29.95 |
| OQU76414 | Sorghum | cytosol | 37.23 | 28.9 |
| KXG30181 | Sorghum | nucleus | 30.98 | 28.32 |
| KXG20380 | Sorghum | cytosol | 17.39 | 16.22 |
Protein Annotations
| EnsemblPlants:EER87847 | EnsemblPlantsGene:SORBI_3010G038000 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF45 | PFAM:PF13589 | ProteinID:EER87847 | ProteinID:EER87847.2 |
| SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0007F2CBF3 | UniProt:C5Z491 | MapMan:12.5.1.2 | : |
Description
hypothetical protein
Coordinates
chr10:-:3023133..3027867
Molecular Weight (calculated)
80648.9 Da
IEP (calculated)
7.765
GRAVY (calculated)
-0.414
Length
736 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAQRDTKPS VSPIITATGA IQRSLHGRSA SQPAPALPSE HGGGARVLAG GLRPQAQPQP HQAACVLNRA ASELSSGGVG GRASGADEAL EEGTSASRRP
101: CVAPRLSRKF WSAGDYDAAA TGSVPQPPSV QNRMCIHPEF LHSNATSHKW PFGAVAELLD NAVDEIEKGR ATTILLDKII DKRNGSPALL VQDDGGGMDP
201: NSMRRCMSFG FSEKQSGSSI GQYGNGFKTS TMRLGADAIV FSRCIKSSEP TQSIGLLSYT FLVETGQTDV VVPVVDYKCN LMKGQTQRLE RHGSEQFSSN
301: LSVLLKWSPF ATEEELMQNF CDIGPHGTKI IVFNLWSNED GKLELDFDTD PADIMISGAP NPEEISNSVK RTNENHLANR LRYSLRVYAS VLYLQLPDYF
401: RIILRGQEVK RHSIIADLMY PECITYKPQG CGIKEAGVLT TIGFLNGSPT ISVHGFNIYH RNRLILPFHR VLSSASSKGR GVSGVLEAGF IKPTHDKQDF
501: EKSQLFQRLI NRLKDMTNEY WDIHSHKIGY VKTPRRSAAP TPPAPPVMLQ IANGAAEEPS ETPPLRSHGN YVNAVPIAFA PPGFNLTPVK TEPVVAPGEP
601: MRCSPSPPNM QTVRVMNHTS SPSMARGTGS AETRKRRNDD SALAVAVKRQ AMQDLAGSSS STNQVCQYMG ERELREFSFL KMENQMLHEE CSHFEAAEKE
701: LLLKEQNLRL EIEKAQEEYK SLLNEHVSVS TVLALR
101: CVAPRLSRKF WSAGDYDAAA TGSVPQPPSV QNRMCIHPEF LHSNATSHKW PFGAVAELLD NAVDEIEKGR ATTILLDKII DKRNGSPALL VQDDGGGMDP
201: NSMRRCMSFG FSEKQSGSSI GQYGNGFKTS TMRLGADAIV FSRCIKSSEP TQSIGLLSYT FLVETGQTDV VVPVVDYKCN LMKGQTQRLE RHGSEQFSSN
301: LSVLLKWSPF ATEEELMQNF CDIGPHGTKI IVFNLWSNED GKLELDFDTD PADIMISGAP NPEEISNSVK RTNENHLANR LRYSLRVYAS VLYLQLPDYF
401: RIILRGQEVK RHSIIADLMY PECITYKPQG CGIKEAGVLT TIGFLNGSPT ISVHGFNIYH RNRLILPFHR VLSSASSKGR GVSGVLEAGF IKPTHDKQDF
501: EKSQLFQRLI NRLKDMTNEY WDIHSHKIGY VKTPRRSAAP TPPAPPVMLQ IANGAAEEPS ETPPLRSHGN YVNAVPIAFA PPGFNLTPVK TEPVVAPGEP
601: MRCSPSPPNM QTVRVMNHTS SPSMARGTGS AETRKRRNDD SALAVAVKRQ AMQDLAGSSS STNQVCQYMG ERELREFSFL KMENQMLHEE CSHFEAAEKE
701: LLLKEQNLRL EIEKAQEEYK SLLNEHVSVS TVLALR
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.