Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P18410_001 | Banana | extracellular | 19.12 | 54.95 |
| CDX81912 | Canola | nucleus | 24.47 | 51.0 |
| GSMUA_Achr4P18400_001 | Banana | cytosol | 19.31 | 49.03 |
| Os11t0454800-01 | Rice | cytosol | 41.87 | 48.34 |
| GSMUA_Achr4P13250_001 | Banana | cytosol | 54.49 | 46.04 |
| Solyc06g071580.2.1 | Tomato | cytosol | 50.29 | 43.76 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 52.2 | 43.33 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 55.26 | 40.76 |
| AT1G19100.1 | Thale cress | nucleus | 50.86 | 40.12 |
| KRH03266 | Soybean | mitochondrion | 50.86 | 39.41 |
| KRH63565 | Soybean | cytosol | 51.63 | 39.24 |
| Bra031063.1-P | Field mustard | nucleus | 49.9 | 39.19 |
| CDY21683 | Canola | nucleus | 48.18 | 39.13 |
| EER87847 | Sorghum | plastid | 54.49 | 38.72 |
| TraesCS3B01G359600.1 | Wheat | cytosol | 52.01 | 38.64 |
| Zm00001d043191_P005 | Maize | cytosol | 54.49 | 38.62 |
| KXG33558 | Sorghum | cytosol | 53.73 | 38.13 |
| TraesCS3D01G322900.1 | Wheat | plastid | 52.2 | 37.97 |
| TraesCS3A01G329400.1 | Wheat | plastid | 52.01 | 37.94 |
| Solyc01g099300.2.1 | Tomato | nucleus | 51.63 | 37.87 |
| CDY41018 | Canola | nucleus | 48.95 | 37.65 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 52.01 | 36.27 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 52.2 | 34.21 |
| CDX81913 | Canola | nucleus | 22.94 | 32.0 |
| GSMUA_Achr11P... | Banana | nucleus | 41.49 | 26.24 |
| GSMUA_Achr1P16580_001 | Banana | cytosol, nucleus, peroxisome | 21.41 | 17.39 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P25210_001 | EnsemblPlants:GSMUA_Achr9T25210_001 | EnsemblPlantsGene:GSMUA_Achr9G25210_001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
| InterPro:IPR036890 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | PFAM:PF13589 | SUPFAM:SSF55874 | UniParc:UPI0002965CD0 |
| UniProt:M0U3C8 | MapMan:12.5.1.2 | : | : | : | : |
Description
ATP-binding region, ATPase-like domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G25210_001]
Coordinates
chr9:-:29770418..29776404
Molecular Weight (calculated)
58758.2 Da
IEP (calculated)
6.902
GRAVY (calculated)
-0.219
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MSILDACGNE EIKIQVKDWK PNILSNIGKE KAYSASVNDQ AVSPNSVISE GFEENRNLQI SNRFLTHSGI SGQGMFSADR FSPACHSSGS CAPLGMQFWS
101: AGDYEVQQFV GPASHNNQNR LCVHPKFLHS NATSHKWVFG AIAELLDNAV DEICNGATFV KLDKIINQRS GSPALLIQDD GGGMDPESLR HCMSFGFSDK
201: QSCSAIGQYG NGFKTSTMRL GADVIVFSRC MNKRVLTQSI GLLSYTFLRQ EGYNDVVVPA VDYYFDPSKG VFTNILRNGQ KQFSSNLSML LKWSPFLTET
301: ELLKNFDDIG HNGTKIIIYN LWFNDMGNME LDFESDEKEI LKQLYLKPVI IMDNDIIVSG APKQVETNNI SVTLTQNHIA TRLCFSLRAY SSILYLHTPE
401: YFRIILRGQE VEHHSIARDL KFCECIKYKP QVGGRIEGEV ITTIGFLKEA PLVNVHGFNI YHKNRLILPF FQVACTSGSW GRGVVGVLEA NFIKPTHDKQ
501: GFEKSSLFTK LETRLKEMTY EYW
101: AGDYEVQQFV GPASHNNQNR LCVHPKFLHS NATSHKWVFG AIAELLDNAV DEICNGATFV KLDKIINQRS GSPALLIQDD GGGMDPESLR HCMSFGFSDK
201: QSCSAIGQYG NGFKTSTMRL GADVIVFSRC MNKRVLTQSI GLLSYTFLRQ EGYNDVVVPA VDYYFDPSKG VFTNILRNGQ KQFSSNLSML LKWSPFLTET
301: ELLKNFDDIG HNGTKIIIYN LWFNDMGNME LDFESDEKEI LKQLYLKPVI IMDNDIIVSG APKQVETNNI SVTLTQNHIA TRLCFSLRAY SSILYLHTPE
401: YFRIILRGQE VEHHSIARDL KFCECIKYKP QVGGRIEGEV ITTIGFLKEA PLVNVHGFNI YHKNRLILPF FQVACTSGSW GRGVVGVLEA NFIKPTHDKQ
501: GFEKSSLFTK LETRLKEMTY EYW
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.