Factsheet for Solyc01g099300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g071580.2.1	Tomato	cytosol	56.24	66.72
CDX81912	Canola	nucleus	20.62	58.57
VIT_17s0000g08750.t01	Wine grape	nucleus	57.36	57.69
KRH63565	Soybean	cytosol	51.19	53.05
AT1G19100.1	Thale cress	nucleus	48.81	52.49
GSMUA_Achr9P25210_001	Banana	cytosol	37.87	51.63
Bra031063.1-P	Field mustard	nucleus	47.55	50.9
CDY21683	Canola	nucleus	45.44	50.31
CDY41018	Canola	nucleus	46.84	49.12
CDX81913	Canola	nucleus	24.54	46.67
KRH03266	Soybean	mitochondrion	42.92	45.33
GSMUA_Achr4P13250_001	Banana	cytosol	39.13	45.07
TraesCS3D01G202400.1	Wheat	cytosol	40.11	44.07
TraesCS3A01G192600.2	Wheat	cytosol	40.11	44.07
TraesCS3B01G231900.1	Wheat	cytosol	39.97	43.91
HORVU3Hr1G046280.3	Barley	cytosol	39.83	43.76
Os01t0549200-02	Rice	cytosol, peroxisome, plastid	22.16	43.53
EES00907	Sorghum	cytosol	41.23	43.49
Os11t0454800-01	Rice	cytosol	27.63	43.49
Zm00001d044506_P006	Maize	cytosol	40.39	41.08
Solyc02g084700.2.1	Tomato	cytosol	36.61	40.53
TraesCS3B01G359600.1	Wheat	cytosol	39.69	40.2
EER87847	Sorghum	plastid	41.09	39.81
TraesCS3A01G329400.1	Wheat	plastid	39.97	39.75
Zm00001d043191_P005	Maize	cytosol	41.09	39.7
TraesCS3D01G322900.1	Wheat	plastid	39.97	39.64
KXG33558	Sorghum	cytosol	40.95	39.62
Zm00001d012575_P001	Maize	mitochondrion, nucleus	40.53	38.53
HORVU3Hr1G078330.4	Barley	endoplasmic reticulum, plasma membrane	39.97	35.71
HORVU7Hr1G048310.12	Barley	cytosol	41.37	33.68
TraesCS7A01G235300.2	Wheat	nucleus	41.09	29.21
OQU76414	Sorghum	cytosol	38.57	29.01
Solyc03g097520.2.1	Tomato	nucleus	33.8	28.9
Zm00001d045978_P002	Maize	cytosol	38.99	28.45
Solyc01g009920.1.1	Tomato	nucleus	30.57	28.09
TraesCS7D01G235400.1	Wheat	cytosol	40.39	27.38
TraesCS7B01G133500.2	Wheat	cytosol	40.81	26.55
Solyc10g081760.1.1	Tomato	nucleus	31.28	26.36
Solyc02g082290.2.1	Tomato	cytosol	16.69	17.35

Protein Annotations

EnsemblPlants:Solyc01g099300.2.1	EnsemblPlantsGene:Solyc01g099300.2	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:IPR036890
ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF44	PFAM:PF13589	SUPFAM:SSF55874	UniParc:UPI0002768D66
UniProt:K4B0W7	MapMan:12.5.1.2	:	:	:	:

Description

No Description!

Coordinates

chr1:-:89576754..89598665

Molecular Weight (calculated)

79713.5 Da

IEP (calculated)

7.886

GRAVY (calculated)

-0.487

Length

713 amino acids

Sequence
(BLAST)

001: MVGLCSNNLG GGEIETVKLE PILVESLIPQ MECCEADSLP YKKSSSSCGR QDSTATEQSR TSVLDQDQSP IDDSSLCSTS QICPAPLSRQ FWKAGNYDEG
101: HATKSTLKKG SSFLHIHPKF LHSNATSHKW AFGALAELLD NAVDEIQNGA SFVIVDKTPN PRNGSSALMV QDDGGGMDPE AIRRCMSFGF SDKKSASTIG
201: QYGNGFKTSS MRLGADVIVF SRCKKNRKLT QSIGLLSQTF LTRAGLDKIV VPLLDFEFSA AAKKWSSLHG EQHFRNNLSL LLRWSPFATE AELLKQFDDI
301: GDHGTKVIVY NLWYNDEGRM ELDFEADSED IRLSGEANDN EKNASRIKVT DQHLANRLRY SLRAYLSVLY LRIPDNFCIL LRGRVVELHN IAKDLKYPEF
401: IMYKPQTLGF KEGSVITTIG FLKEAPVVNI HGFNVYHKNR LILPFWHVVR YSDSRGRGVV GVLEANFIQP THNKQDFEKT PLFQKLEVRL KEMTWEYWDY
501: HCGLLGYFPK KRPQGPITPQ ASSESRQQHG SYKPIVLGNS SGAVGSNITV RRTVTSEASS ESRQQHGSYK PAVLGNSSGA VGSNITVWGT VTPVFQNNSK
601: QGASKRKAVD HPIEHENLKR TAGLIVDLTG GERSQEILTL TSSGSQDQEA AHLIQENEKL RAQCCECEKR EEELHSKVNK LRKELKEAQR TYAHMLVESR
701: LLDKVKPEED VYI

Best Arabidopsis Sequence Match ( AT1G19100.1 )
(BLAST)

001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT

Arabidopsis Description

MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.