Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072308 | Potato | nucleus | 89.83 | 80.68 |
| Solyc01g009920.1.1 | Tomato | nucleus | 55.08 | 60.05 |
| CDY52039 | Canola | plastid | 38.42 | 47.31 |
| CDX84021 | Canola | plastid | 38.42 | 47.1 |
| Solyc03g097520.2.1 | Tomato | nucleus | 46.22 | 46.88 |
| AT5G13130.1 | Thale cress | nucleus | 39.01 | 46.61 |
| GSMUA_Achr11P... | Banana | nucleus | 45.04 | 46.07 |
| Zm00001d053269_P001 | Maize | cytosol | 13.95 | 45.21 |
| EES10563 | Sorghum | nucleus | 41.96 | 45.05 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 41.96 | 44.99 |
| Zm00001d004118_P003 | Maize | nucleus | 42.2 | 44.74 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 41.61 | 43.62 |
| KXG30181 | Sorghum | nucleus | 41.25 | 43.35 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 40.78 | 42.91 |
| Os02t0469300-02 | Rice | nucleus | 40.43 | 42.59 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 41.61 | 41.51 |
| Bra016690.1-P | Field mustard | plastid | 38.53 | 39.8 |
| CDX97228 | Canola | nucleus, plastid | 38.89 | 39.64 |
| CDX69668 | Canola | nucleus, plastid | 38.89 | 39.54 |
| Solyc02g084700.2.1 | Tomato | cytosol | 28.72 | 37.73 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 27.07 | 36.82 |
| Solyc06g071580.2.1 | Tomato | cytosol | 26.0 | 36.61 |
| Zm00001d053268_P001 | Maize | cytosol | 19.86 | 31.94 |
| Solyc01g099300.2.1 | Tomato | nucleus | 26.36 | 31.28 |
| Solyc02g082290.2.1 | Tomato | cytosol | 14.07 | 17.35 |
Protein Annotations
| EnsemblPlants:Solyc10g081760.1.1 | EnsemblPlantsGene:Solyc10g081760.1 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI0002769A7E | UniProt:K4D362 | MapMan:12.5.1.2 | : | : | : |
Description
No Description!
Coordinates
chr10:+:62768292..62770832
Molecular Weight (calculated)
95760.0 Da
IEP (calculated)
7.397
GRAVY (calculated)
-0.647
Length
846 amino acids
Sequence
(BLAST)
(BLAST)
001: MITMPIKQEL IDLTDDLAEP QITTNTTMHY MVPVNNNGFD DIQESPMKKI KLENPVFIAP LSICPYYSNE LVVASPVSVT SCKQFWKAGD YEGKREGNGV
101: FFSGAYDQTV GMDHVRVHPK FLHSNATSHK WALGAFAELL DNAMDEVCNG ATYVSVDVMD NKKDKGSKML LVEDNGGGMT PDRMRQCMSL GYSAKSKLAN
201: TIGQYGNGFK TSSMRLGGDV IVFSRGRDRA TNMLTQSVGM LSYTFLRSTG KEDIVVPMID FVKRGGTWEM LVRSSADVWK RNSETIVQWS PYESANDLFQ
301: QFEFLKGDQG TRIIIYNLWE DEEGGTELDF DTDPHDIQIR GVSRDEKKIE MAKEYPNSRH FLTYQHSLRS YASILYLRLA PGFRIILRGK DVEHHNLVND
401: MMLSEEITYR PQSVGYESFV ATGTIGFVKD AKHHIDIQGF NVYHKNRLIK PFWRVWNAAG SDGRGVIGVL EANFVEPAHD KQGFERTIVL ARLEARLQFI
501: QKKYWSSNCH FIGYAKRRNV KNTAVSPDQE QPNAGDSTCH DDGSNLKFSR VERERGPVHS SIKDSPVHET SQVYVGSRKV TQPVQLSVQA NQNPFISNVS
601: RRMCHDDTSK SKPTVGEHEK TVPVHSSVQE RNQTMSGDQT QQVCRLNRQP DETQENASVP ERKSGYPFIS NSGYTTCHYD TSKSKSTEHE NTVPVHSSVQ
701: ERNQTMVGDQ TQQASTSNRQ TLGNSVVKME DTMPDDLRVE SSSTKNSLQQ VLHRLQQERA RSESLARMLL EEKARAAKEE QSIRQLERAR TETLARMLIE
801: ERARAAKEEQ SLRSKLKDAS VITQDLLNKV RLLESSRMIV SCNSER
101: FFSGAYDQTV GMDHVRVHPK FLHSNATSHK WALGAFAELL DNAMDEVCNG ATYVSVDVMD NKKDKGSKML LVEDNGGGMT PDRMRQCMSL GYSAKSKLAN
201: TIGQYGNGFK TSSMRLGGDV IVFSRGRDRA TNMLTQSVGM LSYTFLRSTG KEDIVVPMID FVKRGGTWEM LVRSSADVWK RNSETIVQWS PYESANDLFQ
301: QFEFLKGDQG TRIIIYNLWE DEEGGTELDF DTDPHDIQIR GVSRDEKKIE MAKEYPNSRH FLTYQHSLRS YASILYLRLA PGFRIILRGK DVEHHNLVND
401: MMLSEEITYR PQSVGYESFV ATGTIGFVKD AKHHIDIQGF NVYHKNRLIK PFWRVWNAAG SDGRGVIGVL EANFVEPAHD KQGFERTIVL ARLEARLQFI
501: QKKYWSSNCH FIGYAKRRNV KNTAVSPDQE QPNAGDSTCH DDGSNLKFSR VERERGPVHS SIKDSPVHET SQVYVGSRKV TQPVQLSVQA NQNPFISNVS
601: RRMCHDDTSK SKPTVGEHEK TVPVHSSVQE RNQTMSGDQT QQVCRLNRQP DETQENASVP ERKSGYPFIS NSGYTTCHYD TSKSKSTEHE NTVPVHSSVQ
701: ERNQTMVGDQ TQQASTSNRQ TLGNSVVKME DTMPDDLRVE SSSTKNSLQQ VLHRLQQERA RSESLARMLL EEKARAAKEE QSIRQLERAR TETLARMLIE
801: ERARAAKEEQ SLRSKLKDAS VITQDLLNKV RLLESSRMIV SCNSER
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.