CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004118_P003	Maize	nucleus	94.04	92.86
TraesCS2B01G291200.1	Wheat	nucleus	74.24	74.14
TraesCS2A01G273000.2	Wheat	nucleus	73.35	71.62
TraesCS2D01G272300.3	Wheat	nucleus	73.6	68.4
HORVU2Hr1G066650.2	Barley	cytosol	67.01	65.67
CDX71661	Canola	cytosol	12.06	57.58
KXG30181	Sorghum	nucleus	58.76	57.52
CDY03400	Canola	nucleus	48.98	57.36
CDY34330	Canola	nucleus	48.98	57.1
GSMUA_Achr11P...	Banana	nucleus	58.88	56.11
Bra013851.1-P	Field mustard	nucleus	48.73	55.25
CDX92664	Canola	nucleus	48.35	55.06
Bra019199.1-P	Field mustard	cytosol	48.6	55.03
CDY11045	Canola	nucleus	48.48	54.81
AT4G24970.1	Thale cress	nucleus	48.73	54.31
CDX84876	Canola	nucleus	49.75	51.72
Bra022762.1-P	Field mustard	nucleus	49.62	51.52
KRH41106	Soybean	nucleus	52.79	50.73
Solyc03g097520.2.1	Tomato	nucleus	53.68	50.72
KRH59787	Soybean	nucleus	53.05	50.61
CDY45818	Canola	nucleus	49.62	50.45
VIT_17s0000g00910.t01	Wine grape	nucleus	52.16	49.52
AT5G50780.1	Thale cress	nucleus	49.87	47.99
PGSC0003DMT400088594	Potato	nucleus	45.18	47.72
Solyc01g009920.1.1	Tomato	nucleus	44.54	45.23
CDY52039	Canola	plastid	39.09	44.83
AT5G13130.1	Thale cress	nucleus	40.1	44.63
CDX84021	Canola	plastid	38.83	44.35
Solyc10g081760.1.1	Tomato	nucleus	45.05	41.96
KXG24418	Sorghum	cytosol	31.22	41.07
CDX69668	Canola	nucleus, plastid	41.24	39.06
CDX97228	Canola	nucleus, plastid	41.12	39.04
EES00907	Sorghum	cytosol	32.49	37.87
PGSC0003DMT400072308	Potato	nucleus	45.18	37.79
Bra016690.1-P	Field mustard	plastid	39.21	37.73
Bra008854.1-P	Field mustard	nucleus, plastid	28.81	36.5
VIT_13s0147g00080.t01	Wine grape	cytosol	18.02	35.24
EER87847	Sorghum	plastid	29.95	32.07
KXG33558	Sorghum	cytosol	28.93	30.94
OQU76414	Sorghum	cytosol	30.33	25.21
KXG20380	Sorghum	cytosol	15.61	15.59

Protein Annotations

EnsemblPlants:EES10563	EnsemblPlantsGene:SORBI_3006G039800	EntrezGene:8086471	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:IPR036890	ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF21	PFAM:PF13589	ProteinID:EES10563
ProteinID:EES10563.2	RefSeq:XP_002446235.1	SEG:seg	SUPFAM:SSF55874	unigene:Sbi.7470	UniParc:UPI000B8B96FC
UniProt:C5YDT7	MapMan:12.5.1.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:19123733..19165312

Molecular Weight (calculated)

87828.4 Da

IEP (calculated)

8.721

GRAVY (calculated)

-0.709

Length

788 amino acids

Sequence
(BLAST)

001: MVKTEAAEER GPLSRTAAAS VAVGGSGRRT ATAVIDLSSS DSDSDGEGGV GSGKRARGAG GDGSATKRAR VSAVVDLPPG FLEPIQPPTL PVPLAACATK
101: QFWKAGDYDG KPLGDGVAQP SVSGMDHVRV HPRFLHSNAT SHKWALGALA ELLDNSLDEV INGATYVNID VLENDKGIDK EKSRMLLVED DGGGMDPDKM
201: RQCMSLGYSV KSKVASTIGQ YGNGFKTSTM RLGADVLVFS RSRGKSGKRP TQSIGMLSYT FLRSTGKEDI IVPMIDYEYK QGWERMVRTT LDDWSTSLQT
301: IITWSPYSTE AELLEQFSSM KDRGTRIIIY NLWEDDQGDL ELDFDAEVHD IQLRGGNRDE KNIQMAKQFP NSKHYLTYRH SLRSYASILY LRLPTYFQMI
401: LRGKDIEHHN IVTDMMLKKE VTYRPVAPNG HPKDSNMVAD VTIGFVKDAK HHIDVQGFNV YHKNRLIKPF WRVWTAAGSG GRGVIGVLEA NFIEPAHDKQ
501: DFERTTLLAR LEARLVQMQK DYWSGNAHRI GYVAPRSGRN SDAGDGEDSR ENTASAQPSP YHSGKGYTQA KDMNNNIKKG GKASTSFGIQ QRAEKSARTK
601: RSMKSILHGL SDSDNSDSEF MGTLPRSRSH TVNRNQKLFQ NGSTDLTTPQ SSGLIERDRG RTKSQPLDPK ATSNRDLHTI DEYESVIKQL RDENLSLKER
701: LSKVEESLLQ ELVVERDKNK SLTERVEDLQ RQFESATKEQ EALIDIFSEE RNRRDQEEES LRKKLKDASS TIQDLLEQLN AARKGRKV

Best Arabidopsis Sequence Match ( AT5G50780.2 )
(BLAST)

001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR

Arabidopsis Description

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.