Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71661 | Canola | cytosol | 12.09 | 60.61 |
| CDY03400 | Canola | nucleus | 48.85 | 60.03 |
| CDY34330 | Canola | nucleus | 48.73 | 59.62 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 56.59 | 59.32 |
| EES10563 | Sorghum | nucleus | 56.11 | 58.88 |
| Zm00001d004118_P003 | Maize | nucleus | 56.35 | 58.4 |
| CDX92664 | Canola | nucleus | 48.73 | 58.24 |
| CDY11045 | Canola | nucleus | 48.97 | 58.11 |
| Bra019199.1-P | Field mustard | cytosol | 48.85 | 58.05 |
| Bra013851.1-P | Field mustard | nucleus | 48.61 | 57.84 |
| AT4G24970.1 | Thale cress | nucleus | 48.73 | 57.0 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 55.26 | 56.63 |
| Solyc03g097520.2.1 | Tomato | nucleus | 56.23 | 55.76 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 53.93 | 55.47 |
| KRH41106 | Soybean | nucleus | 54.41 | 54.88 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 54.9 | 54.7 |
| KRH59787 | Soybean | nucleus | 54.05 | 54.12 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 55.38 | 54.01 |
| Zm00001d053269_P001 | Maize | cytosol | 16.93 | 53.64 |
| KXG30181 | Sorghum | nucleus | 51.63 | 53.04 |
| CDX84876 | Canola | nucleus | 48.13 | 52.51 |
| Bra022762.1-P | Field mustard | nucleus | 48.0 | 52.31 |
| Os02t0469300-02 | Rice | nucleus | 50.67 | 52.18 |
| GSMUA_Achr4P18410_001 | Banana | extracellular | 11.25 | 51.1 |
| CDY45818 | Canola | nucleus | 47.76 | 50.97 |
| PGSC0003DMT400088594 | Potato | nucleus | 44.38 | 49.2 |
| GSMUA_Achr4P18400_001 | Banana | cytosol | 12.21 | 49.03 |
| AT5G50780.1 | Thale cress | nucleus | 48.49 | 48.96 |
| CDY52039 | Canola | plastid | 39.66 | 47.74 |
| Solyc01g009920.1.1 | Tomato | nucleus | 44.74 | 47.68 |
| CDX84021 | Canola | plastid | 39.42 | 47.25 |
| AT5G13130.1 | Thale cress | nucleus | 40.39 | 47.18 |
| Solyc10g081760.1.1 | Tomato | nucleus | 46.07 | 45.04 |
| Zm00001d053268_P001 | Maize | cytosol | 27.93 | 43.92 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 26.24 | 41.49 |
| CDX97228 | Canola | nucleus, plastid | 41.48 | 41.33 |
| CDX69668 | Canola | nucleus, plastid | 41.23 | 40.99 |
| Bra016690.1-P | Field mustard | plastid | 39.78 | 40.17 |
| PGSC0003DMT400072308 | Potato | nucleus | 45.71 | 40.13 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 19.11 | 39.21 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 29.02 | 38.59 |
| GSMUA_Achr4P13250_001 | Banana | cytosol | 27.45 | 36.67 |
| GSMUA_Achr1P16580_001 | Banana | cytosol, nucleus, peroxisome | 13.42 | 17.24 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P11390_001 | EnsemblPlants:GSMUA_Achr11T11390_001 | EnsemblPlantsGene:GSMUA_Achr11G11390_001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
| InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | PFAM:PF13589 | SEG:seg |
| SUPFAM:SSF55874 | UniParc:UPI0002956F27 | UniProt:M0RRB9 | MapMan:12.5.1.2 | : | : |
Description
ATP-binding region, ATPase-like domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G11390_001]
Coordinates
chr11:-:9011967..9036613
Molecular Weight (calculated)
92279.3 Da
IEP (calculated)
8.796
GRAVY (calculated)
-0.674
Length
827 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSIVKKEIV VATEPLDDSV IDLSSSDSDW EAEGDGTAKR RRKPDGMGGP LKKSRTVGIL PAGFLDPLSP EEPLPLLLPQ PPRSRSPVAL LRCKQFWKAG
101: DFDESLNPNP TPLRGMDHVR VHPKFLHSNA TSHKWALGAL AELLDNSLDE VCNGSTFVNI DMLINKKNGS KMLLVEDNGG GMDPDKMRQC MSLGYSAKSK
201: IANTIGQYGN GFKTSTMRLG ADVIVFSRSH GKDGRRPTQT IGMLSYTFLR NTGKEDIVVP MLDYEKGKVW SKMLRSSLAD WNTNLETIIQ WSPYSSEADL
301: LQQFSSVKDQ GTRIVIYNLW EDDQGELELD FDADEHDIQV RGVNRDEKKI EMAMKFPNSR HFLTYRHSLR SYASILYLRL PNVFRMILRG KEIEHHNIVN
401: DMMLKQEVTY KPQSVAEGVP KDPNMVAVVT IGFVKDAKDH IDVQGFNVYH KNRLIKPFWR VWSAAGSDGR GVIGVLEANF IEPAHDKQDF ERTTILSRLE
501: ARLVQMQKTY WSNNCHRIGY APRVNKKTIE QDDKESSPEA PVHQLSRHSL KFTSPSSGTH ASKSSAPDKV GYKYLPSSSG KTGKASASAF VLGKSGNQKS
601: GSLASSMDCG VKSAMKVGKN IRAQSRSSGI HAVDDESDSE TECTASVKRT HDSNIPKAIF SSRTSDKIVA PPTLSPPPYS AHNGAQGDHT TNGVAGIERV
701: ATRSQGKASK IISGENGPSA EDSANIKQLK DENEELKKRI IKMEESTTKE LQYERDRNKS LLEQFEAAQK SLEEANKEQE ALIDIFSEER SRRDKEEENL
801: RKKLKDASRT IQELLEKLAK RQNDLKS
101: DFDESLNPNP TPLRGMDHVR VHPKFLHSNA TSHKWALGAL AELLDNSLDE VCNGSTFVNI DMLINKKNGS KMLLVEDNGG GMDPDKMRQC MSLGYSAKSK
201: IANTIGQYGN GFKTSTMRLG ADVIVFSRSH GKDGRRPTQT IGMLSYTFLR NTGKEDIVVP MLDYEKGKVW SKMLRSSLAD WNTNLETIIQ WSPYSSEADL
301: LQQFSSVKDQ GTRIVIYNLW EDDQGELELD FDADEHDIQV RGVNRDEKKI EMAMKFPNSR HFLTYRHSLR SYASILYLRL PNVFRMILRG KEIEHHNIVN
401: DMMLKQEVTY KPQSVAEGVP KDPNMVAVVT IGFVKDAKDH IDVQGFNVYH KNRLIKPFWR VWSAAGSDGR GVIGVLEANF IEPAHDKQDF ERTTILSRLE
501: ARLVQMQKTY WSNNCHRIGY APRVNKKTIE QDDKESSPEA PVHQLSRHSL KFTSPSSGTH ASKSSAPDKV GYKYLPSSSG KTGKASASAF VLGKSGNQKS
601: GSLASSMDCG VKSAMKVGKN IRAQSRSSGI HAVDDESDSE TECTASVKRT HDSNIPKAIF SSRTSDKIVA PPTLSPPPYS AHNGAQGDHT TNGVAGIERV
701: ATRSQGKASK IISGENGPSA EDSANIKQLK DENEELKKRI IKMEESTTKE LQYERDRNKS LLEQFEAAQK SLEEANKEQE ALIDIFSEER SRRDKEEENL
801: RKKLKDASRT IQELLEKLAK RQNDLKS
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.