Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G291200.1 | Wheat | nucleus | 83.08 | 84.66 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 81.84 | 81.54 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 81.84 | 77.59 |
| EES10563 | Sorghum | nucleus | 65.67 | 67.01 |
| Zm00001d004118_P003 | Maize | nucleus | 65.8 | 66.29 |
| CDY03400 | Canola | nucleus | 45.27 | 54.09 |
| CDY34330 | Canola | nucleus | 45.4 | 53.99 |
| CDX71661 | Canola | cytosol | 11.07 | 53.94 |
| GSMUA_Achr11P... | Banana | nucleus | 55.47 | 53.93 |
| Bra013851.1-P | Field mustard | nucleus | 45.27 | 52.37 |
| Bra019199.1-P | Field mustard | cytosol | 45.15 | 52.16 |
| CDY11045 | Canola | nucleus | 45.15 | 52.08 |
| CDX92664 | Canola | nucleus | 44.78 | 52.02 |
| AT4G24970.1 | Thale cress | nucleus | 44.4 | 50.49 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 50.87 | 49.28 |
| KRH41106 | Soybean | nucleus | 49.5 | 48.54 |
| CDX84876 | Canola | nucleus | 45.65 | 48.42 |
| Bra022762.1-P | Field mustard | nucleus | 45.52 | 48.22 |
| Solyc03g097520.2.1 | Tomato | nucleus | 49.88 | 48.08 |
| KRH59787 | Soybean | nucleus | 49.25 | 47.94 |
| CDY45818 | Canola | nucleus | 45.77 | 47.48 |
| AT5G50780.1 | Thale cress | nucleus | 46.77 | 45.91 |
| PGSC0003DMT400088594 | Potato | nucleus | 42.54 | 45.84 |
| Solyc01g009920.1.1 | Tomato | nucleus | 42.04 | 43.56 |
| CDY52039 | Canola | plastid | 37.19 | 43.52 |
| CDX84021 | Canola | plastid | 37.06 | 43.19 |
| AT5G13130.1 | Thale cress | nucleus | 37.81 | 42.94 |
| Solyc10g081760.1.1 | Tomato | nucleus | 42.91 | 40.78 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 30.47 | 40.43 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 30.72 | 39.33 |
| CDX69668 | Canola | nucleus, plastid | 39.3 | 37.98 |
| CDX97228 | Canola | nucleus, plastid | 39.18 | 37.95 |
| HORVU3Hr1G046280.3 | Barley | cytosol | 30.22 | 37.44 |
| Bra016690.1-P | Field mustard | plastid | 37.31 | 36.63 |
| PGSC0003DMT400072308 | Potato | nucleus | 42.91 | 36.62 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 17.54 | 34.99 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 26.99 | 34.89 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 29.23 | 29.45 |
| HORVU7Hr1G048310.12 | Barley | cytosol | 28.48 | 26.14 |
| HORVU1Hr1G080470.5 | Barley | cytosol | 14.05 | 14.66 |
| HORVU7Hr1G093640.3 | Barley | cytosol | 5.72 | 13.18 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G066650.2 | EnsemblPlantsGene:HORVU2Hr1G066650 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF21 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI000B471ECB | UniProt:A0A287I9J2 | MapMan:12.5.1.2 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:462653658..462671143
Molecular Weight (calculated)
79649.6 Da
IEP (calculated)
7.202
GRAVY (calculated)
-0.632
Length
804 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXPGFL
101: DPLPALPQPP RATTKQFWKA GDYDGNPAGA VEPPPSASGL EHVRVHPKFL HSNATSHKWA LGALAELLDN SLDEVRNGAT FVNIDMLENS KDKTRMLLVE
201: DNGGGMDPDK MRQCMSLGYS AKSQAANTIG QYGNGFKTST MRLGADVLVF SRSRGKEGKR PTQSIGMLSY TFLRSTCKED IVVPMIDYEK NGMNWTRKLR
301: STFADWNTSL QTIITWSPYG TEAELLEQFS SIKEQGTRVI IYNLWEDDQG DLELDFDADV NDIQLRGGNR DEKNIEMAKR FPTSKHFLTY RHSLRSYASI
401: LYLRLSDAFQ IILRGKEIEH HNIVTDMMLK KEVTYRPVAT NGLPKDSNMV ADVTIGFVKD AKFHIDVQGF NVYHRNRLIK PFWRVWTASG SGGRGVIGVL
501: EANFIEPAHD KQDFERTTLL ARLEARLIQM QKDYWSGNAH RIGYVGARSF RSPETGRENS PEGSPGAQPS PGHSGKDYPK QRNAGKSHPT SSKKSGKTST
601: PFSCQQAEKS ARTKRSASSI LHGLPDTSDD SDSEFVNTPS LTSKSHILSA HRKYFQNENT SFATPASNGT TDFIILNIFS LQEPNARSNV DGHSIEDHEP
701: VIKQLRDENS SLKERLSIVE ETMSQELVIE RDKVKSLTER LEDLQRQLDT ANKEQEALID IFSEERSRRD EEEENLRQKL KEASNTIQEL LLEKSKDGRK
801: GQKV
101: DPLPALPQPP RATTKQFWKA GDYDGNPAGA VEPPPSASGL EHVRVHPKFL HSNATSHKWA LGALAELLDN SLDEVRNGAT FVNIDMLENS KDKTRMLLVE
201: DNGGGMDPDK MRQCMSLGYS AKSQAANTIG QYGNGFKTST MRLGADVLVF SRSRGKEGKR PTQSIGMLSY TFLRSTCKED IVVPMIDYEK NGMNWTRKLR
301: STFADWNTSL QTIITWSPYG TEAELLEQFS SIKEQGTRVI IYNLWEDDQG DLELDFDADV NDIQLRGGNR DEKNIEMAKR FPTSKHFLTY RHSLRSYASI
401: LYLRLSDAFQ IILRGKEIEH HNIVTDMMLK KEVTYRPVAT NGLPKDSNMV ADVTIGFVKD AKFHIDVQGF NVYHRNRLIK PFWRVWTASG SGGRGVIGVL
501: EANFIEPAHD KQDFERTTLL ARLEARLIQM QKDYWSGNAH RIGYVGARSF RSPETGRENS PEGSPGAQPS PGHSGKDYPK QRNAGKSHPT SSKKSGKTST
601: PFSCQQAEKS ARTKRSASSI LHGLPDTSDD SDSEFVNTPS LTSKSHILSA HRKYFQNENT SFATPASNGT TDFIILNIFS LQEPNARSNV DGHSIEDHEP
701: VIKQLRDENS SLKERLSIVE ETMSQELVIE RDKVKSLTER LEDLQRQLDT ANKEQEALID IFSEERSRRD EEEENLRQKL KEASNTIQEL LLEKSKDGRK
801: GQKV
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.