Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G399000.1 | Wheat | cytosol | 93.98 | 43.21 |
| TraesCS7D01G393200.1 | Wheat | cytosol | 93.98 | 43.16 |
| TraesCS7B01G299600.1 | Wheat | cytosol | 93.41 | 42.89 |
| Os06t0622000-01 | Rice | cytosol | 69.34 | 30.56 |
| KXG20380 | Sorghum | cytosol | 63.04 | 27.88 |
| VIT_04s0044g01710.t01 | Wine grape | plastid | 46.99 | 27.75 |
| GSMUA_Achr1P16580_001 | Banana | cytosol, nucleus, peroxisome | 49.86 | 27.02 |
| Zm00001d046722_P007 | Maize | cytosol | 63.04 | 26.25 |
| HORVU1Hr1G080470.5 | Barley | cytosol | 54.15 | 24.51 |
| Solyc02g082290.2.1 | Tomato | cytosol | 46.99 | 23.91 |
| KRH76501 | Soybean | cytosol | 45.27 | 23.0 |
| HORVU3Hr1G046280.3 | Barley | cytosol | 14.61 | 7.86 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 12.89 | 7.43 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 12.03 | 6.69 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 14.9 | 6.52 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 13.18 | 5.72 |
| HORVU7Hr1G048310.12 | Barley | cytosol | 13.75 | 5.48 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G093640.3 | EnsemblPlantsGene:HORVU7Hr1G093640 | Gene3D:3.30.40.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011124 | InterPro:Znf_CW | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF11 | PFAM:PF07496 | PFscan:PS51050 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:571713500..571718641
Molecular Weight (calculated)
39231.2 Da
IEP (calculated)
7.716
GRAVY (calculated)
-0.732
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: XRANSGRTDE NPIDQGRGDI LIRSKRVRSR PGQTSKQVPL DYSLHSYLEV IFRNPRMKIT VQGSQVKARP LDKSLNTTSV ISGDIAGRTI ELTIGMSKLE
101: WERTNCGVFL YWRGRLIESY KRVGGQMHNA DTGRGVIGVA DITELVDDED GNSWVLNSKQ GFQDCEMYAE LEEWLGSSMD EYWETNFDNV ELEKAAGRCK
201: PDHEWVQCYG CRKWRLLTTG FDTESLPDQW FCLMPPFNGK CTIPEQQMGH GSITIGEKRS GNVGRNRITQ REATAKVDSY KIGNNEFSQD EDVKNVKLIP
301: TIVNKRKNTS NGANSIEDDL DGNSSQTESV APLHVLKRIR RGGARSCKT
101: WERTNCGVFL YWRGRLIESY KRVGGQMHNA DTGRGVIGVA DITELVDDED GNSWVLNSKQ GFQDCEMYAE LEEWLGSSMD EYWETNFDNV ELEKAAGRCK
201: PDHEWVQCYG CRKWRLLTTG FDTESLPDQW FCLMPPFNGK CTIPEQQMGH GSITIGEKRS GNVGRNRITQ REATAKVDSY KIGNNEFSQD EDVKNVKLIP
301: TIVNKRKNTS NGANSIEDDL DGNSSQTESV APLHVLKRIR RGGARSCKT
0001: MGEDYELEEG EMNCSSDEAV VDLDVDLSYI DKKVQNVLGH LQKGFGEEAR DRFGPEIFDY GSFLPTYKRL PAVPSCQRSS LGNHAVQRIS NSLPGKNVVQ
0101: KFQSPPATSC KLVRNQDPQN YQTSGSLLAQ APGKVPINKG NARTPANDLP HNKPIRVRIK MGSEILSQSV AMVCKDLGLD GSPNSPPRIS QDDSSRMLPH
0201: TSLGKTSESP SRILQEMTAI SVPEDLLMSP LPDSLLLVKD KKKQYTLLDN QPMIKTGKKS SIQIQNKFSD VLCCEKTPIG RRRKEVDCFH ATTWNETKKH
0301: KVLSTGQLAR DNSACGLGGA SLTTDGFTTK SNLQEGCRKD GESDPRVANK IKFVGLHAVK EKKTCPTKLQ QNRSKYRIGD KVLSKMPLKD AAYIGHNSMD
0401: TGFDFAVAPS STSVDLDYWA QCESCEKWRL LPYDLNTEKL PDKWLCSMQT WLPGMNHCGV SEEETTNAIK SFHASEGHGP DTGVKLLSDV RNADKIYQPL
0501: TSGSLPNPIE KKSNVEDLSQ GVSSNILVDA AKPMRSNPHI FKNKNMKLPG ETPTATQISA DLSHDFFQDK IDQKAKRRAA GAGCQIKVKK KKEADKEESD
0601: GSKHIKTGDG NKLARVIKAE EIHWNQDPKW TPAERKRKRH DNDFCTLNVE RDPKKRLLVS KKKPDHKPQL ITASGSLCTK AQGNINSTVR KIRLMGYKQG
0701: KDGKNSKLFA DGEENEPSME KAVTTKISVH ESKANQRNEL FQADCFQEHL NGDASCRYFS GGSGQISGIE TSNSSKVLGS HKSGRMYVEE VKASPVESVS
0801: SSPARSSCPT NDILQEAEKL RKLADCFKSS GFEYEYKEIN FKAALRFLLG ASVLEMCSTD NVEVGKMSHI EAYHTAAKLS ESCAHQYETS QEMAAATLAY
0901: KCTEVACMRL VYGRSLGLSG EWNELQKMVQ MTPQGESPSS SASDVDSFNH QGVIKKSAKT RRGLSHVAGN LLPVARSQLN FVPLLDFTGS MNLAMEASAK
1001: SQNAFKAVTD TSEERKHGDC ISAIKKVVDF SFHDVEALIK MIEVAMDALS SSRFGGPKC
0101: KFQSPPATSC KLVRNQDPQN YQTSGSLLAQ APGKVPINKG NARTPANDLP HNKPIRVRIK MGSEILSQSV AMVCKDLGLD GSPNSPPRIS QDDSSRMLPH
0201: TSLGKTSESP SRILQEMTAI SVPEDLLMSP LPDSLLLVKD KKKQYTLLDN QPMIKTGKKS SIQIQNKFSD VLCCEKTPIG RRRKEVDCFH ATTWNETKKH
0301: KVLSTGQLAR DNSACGLGGA SLTTDGFTTK SNLQEGCRKD GESDPRVANK IKFVGLHAVK EKKTCPTKLQ QNRSKYRIGD KVLSKMPLKD AAYIGHNSMD
0401: TGFDFAVAPS STSVDLDYWA QCESCEKWRL LPYDLNTEKL PDKWLCSMQT WLPGMNHCGV SEEETTNAIK SFHASEGHGP DTGVKLLSDV RNADKIYQPL
0501: TSGSLPNPIE KKSNVEDLSQ GVSSNILVDA AKPMRSNPHI FKNKNMKLPG ETPTATQISA DLSHDFFQDK IDQKAKRRAA GAGCQIKVKK KKEADKEESD
0601: GSKHIKTGDG NKLARVIKAE EIHWNQDPKW TPAERKRKRH DNDFCTLNVE RDPKKRLLVS KKKPDHKPQL ITASGSLCTK AQGNINSTVR KIRLMGYKQG
0701: KDGKNSKLFA DGEENEPSME KAVTTKISVH ESKANQRNEL FQADCFQEHL NGDASCRYFS GGSGQISGIE TSNSSKVLGS HKSGRMYVEE VKASPVESVS
0801: SSPARSSCPT NDILQEAEKL RKLADCFKSS GFEYEYKEIN FKAALRFLLG ASVLEMCSTD NVEVGKMSHI EAYHTAAKLS ESCAHQYETS QEMAAATLAY
0901: KCTEVACMRL VYGRSLGLSG EWNELQKMVQ MTPQGESPSS SASDVDSFNH QGVIKKSAKT RRGLSHVAGN LLPVARSQLN FVPLLDFTGS MNLAMEASAK
1001: SQNAFKAVTD TSEERKHGDC ISAIKKVVDF SFHDVEALIK MIEVAMDALS SSRFGGPKC
Arabidopsis Description
At4g15730 [Source:UniProtKB/TrEMBL;Acc:Q8GY51]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.