Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G231900.1 | Wheat | cytosol | 96.15 | 96.15 |
| TraesCS3D01G202400.1 | Wheat | cytosol | 95.53 | 95.53 |
| TraesCS3A01G192600.2 | Wheat | cytosol | 95.22 | 95.22 |
| Os01t0549200-02 | Rice | cytosol, peroxisome, plastid | 44.38 | 79.34 |
| EES00907 | Sorghum | cytosol | 79.51 | 76.33 |
| Zm00001d044506_P006 | Maize | cytosol | 77.04 | 71.33 |
| GSMUA_Achr4P13250_001 | Banana | cytosol | 51.62 | 54.12 |
| CDX81912 | Canola | nucleus | 18.8 | 48.61 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 43.3 | 44.6 |
| Solyc06g071580.2.1 | Tomato | cytosol | 40.37 | 43.59 |
| Bra031063.1-P | Field mustard | nucleus | 43.91 | 42.79 |
| KRH03266 | Soybean | mitochondrion | 44.38 | 42.67 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 46.38 | 42.45 |
| CDY21683 | Canola | nucleus | 41.76 | 42.08 |
| AT1G19100.1 | Thale cress | nucleus | 42.68 | 41.78 |
| KRH63565 | Soybean | cytosol | 44.07 | 41.57 |
| CDY41018 | Canola | nucleus | 42.99 | 41.03 |
| Solyc01g099300.2.1 | Tomato | nucleus | 43.76 | 39.83 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 37.29 | 38.53 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 35.9 | 38.45 |
| CDX81913 | Canola | nucleus | 22.03 | 38.13 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 46.53 | 37.84 |
| HORVU7Hr1G048310.12 | Barley | cytosol | 41.76 | 30.94 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 37.44 | 30.22 |
| HORVU1Hr1G080470.5 | Barley | cytosol | 18.64 | 15.69 |
| HORVU7Hr1G093640.3 | Barley | cytosol | 7.86 | 14.61 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G046280.3 | EnsemblPlantsGene:HORVU3Hr1G046280 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF44 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI0003D7EFEF | UniProt:A0A287KXW2 | MapMan:12.5.1.2 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:307953444..308000381
Molecular Weight (calculated)
73187.9 Da
IEP (calculated)
7.257
GRAVY (calculated)
-0.503
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSGGAADVI DLSSDDDEEP LPFPSTSAVT SAPSPPRDVK PYELADVKPL FYPIQAPGCY ALVPVKDEDP VPLPLAAEAP RALPAPRLCR QFWKSGEYVV
101: ARRNPDADAP GGRNRLRINP KFLHSNATSH KWAFGAIAEL LDNAIDEVNN GATFVRVNKF TNPRDGSPSL LVQDDGGGMD PDALRCCMSF GFSDKQSDAF
201: IGQYGNGFKT STMRLGADVI VFTQNQKNWT PTRSIGLLSY TFLMETGCDD VLVPTVDYHY DLTTSSYTQL LRHNQKLFSS NLAILLKWSP FGSEAELLKQ
301: FDDMGEHGTK IIVFNLWFND DGDMELDFNS DKKDILITGA QKKVKTNKHE KHVTQDYIAN RLRHSLRAYA SILYLRVPDS FRIILRGQDV EPHNVVNDLM
401: YRECVLYKPQ IAGLPELSIV TTIGFVKGAP DTDVQGFNVY HKNRLIMPFW KVASNSYGKG RGVVGILDAS FIKPTHDKQD FEKSVLYQRL ENRLKEMTYE
501: YWGLHCHRLG YDNKSLPKAS RALYRAKQAG TGSSPASVPH QLLTADVPTS SCAQSSMGQK RNFDALGVIS DINNHQTKHR DAIQRKRFHE YKTLTLENDK
601: LRDECLQYEE SEKQLVEKEQ KLRYQIAKET KKYEGLLEEL KILDVKLET
101: ARRNPDADAP GGRNRLRINP KFLHSNATSH KWAFGAIAEL LDNAIDEVNN GATFVRVNKF TNPRDGSPSL LVQDDGGGMD PDALRCCMSF GFSDKQSDAF
201: IGQYGNGFKT STMRLGADVI VFTQNQKNWT PTRSIGLLSY TFLMETGCDD VLVPTVDYHY DLTTSSYTQL LRHNQKLFSS NLAILLKWSP FGSEAELLKQ
301: FDDMGEHGTK IIVFNLWFND DGDMELDFNS DKKDILITGA QKKVKTNKHE KHVTQDYIAN RLRHSLRAYA SILYLRVPDS FRIILRGQDV EPHNVVNDLM
401: YRECVLYKPQ IAGLPELSIV TTIGFVKGAP DTDVQGFNVY HKNRLIMPFW KVASNSYGKG RGVVGILDAS FIKPTHDKQD FEKSVLYQRL ENRLKEMTYE
501: YWGLHCHRLG YDNKSLPKAS RALYRAKQAG TGSSPASVPH QLLTADVPTS SCAQSSMGQK RNFDALGVIS DINNHQTKHR DAIQRKRFHE YKTLTLENDK
601: LRDECLQYEE SEKQLVEKEQ KLRYQIAKET KKYEGLLEEL KILDVKLET
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.