CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81912	Canola	nucleus	23.11	63.35
VIT_17s0000g08750.t01	Wine grape	nucleus	64.1	62.2
AT1G19100.1	Thale cress	nucleus	53.34	55.35
KRH03266	Soybean	mitochondrion	54.22	55.26
Solyc06g071580.2.1	Tomato	cytosol	48.26	55.24
Bra031063.1-P	Field mustard	nucleus	51.74	53.45
CDY21683	Canola	nucleus	49.56	52.95
CDY41018	Canola	nucleus	51.6	52.21
GSMUA_Achr9P25210_001	Banana	cytosol	39.24	51.63
Solyc01g099300.2.1	Tomato	nucleus	53.05	51.19
CDX81913	Canola	nucleus	26.02	47.73
Os01t0549200-02	Rice	cytosol, peroxisome, plastid	24.42	46.28
GSMUA_Achr4P13250_001	Banana	cytosol	40.55	45.07
TraesCS3A01G192600.2	Wheat	cytosol	41.72	44.22
TraesCS3B01G231900.1	Wheat	cytosol	41.72	44.22
HORVU3Hr1G046280.3	Barley	cytosol	41.57	44.07
TraesCS3D01G202400.1	Wheat	cytosol	41.57	44.07
Os11t0454800-01	Rice	cytosol	28.49	43.27
EES00907	Sorghum	cytosol	42.15	42.9
Zm00001d044506_P006	Maize	cytosol	41.28	40.51
KRH08132	Soybean	cytosol	36.63	40.0
TraesCS3B01G359600.1	Wheat	cytosol	40.55	39.63
TraesCS3A01G329400.1	Wheat	plastid	41.13	39.47
TraesCS3D01G322900.1	Wheat	plastid	41.13	39.36
KRH69835	Soybean	cytosol	36.63	38.24
EER87847	Sorghum	plastid	40.84	38.18
KXG33558	Sorghum	cytosol	40.84	38.13
Zm00001d043191_P005	Maize	cytosol	40.55	37.8
Zm00001d012575_P001	Maize	mitochondrion, nucleus	39.24	36.0
HORVU3Hr1G078330.4	Barley	endoplasmic reticulum, plasma membrane	40.26	34.71
HORVU7Hr1G048310.12	Barley	cytosol	39.68	31.16
KRH41106	Soybean	nucleus	35.76	30.0
KRH59787	Soybean	nucleus	34.88	29.06
TraesCS7A01G235300.2	Wheat	nucleus	41.28	28.32
OQU76414	Sorghum	cytosol	38.23	27.74
Zm00001d045978_P002	Maize	cytosol	38.23	26.92
TraesCS7D01G235400.1	Wheat	cytosol	41.13	26.9
TraesCS7B01G133500.2	Wheat	cytosol	40.41	25.36
KRH76501	Soybean	cytosol	17.73	17.76

Protein Annotations

EMBL:ACUP02002702	EnsemblPlants:KRH63565	EnsemblPlantsGene:GLYMA_04G185300	EntrezGene:100795667	Gene3D:3.30.565.10	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:IPR036890	ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF44	PFAM:PF13589
ProteinID:KRH63565	ProteinID:KRH63565.1	SUPFAM:SSF55874	UniParc:UPI000233A80A	UniProt:I1JX93	MapMan:12.5.1.2

Description

hypothetical protein

Coordinates

chr4:+:45507584..45521210

Molecular Weight (calculated)

77564.1 Da

IEP (calculated)

6.910

GRAVY (calculated)

-0.477

Length

688 amino acids

Sequence
(BLAST)

001: MGPTEVVYLS SDDESEKEVA FKAVKLEEDF VLDAKQYNET NKGQLAKHKR SQSHTTGQDS EENLSSNGPS TGHSNSSVLE QGPSPVDDTG ISYASSIGVA
101: PLCRQFWKAG NYDDGLGSKV TVQNAKNYLH VHPMFLHSNA TSHKWAFGAI AELLDNAVDE IQNGATFVIV DKTSNPRDGN PALLIQDDGG GMDPDAMRRC
201: MSFGFSDKKS QFAIGRYGNG FKTSSMRLGA DVIVFSCHLN NRILTQSIGL LSYTYLIKTQ LDRIVVPMVN YEFDTSTGSL KILNGNEHFV SNLSLLLRWS
301: PYSSEADLLK QFDDIGSHGT KVIIYNLWCN DDANLELDFD TDPTDIRIAG DVKQIDTLKA WKSVNEEHIA NRLRYSLHVY MSILYLKIPE SFQMILRGQV
401: VKPHNIADDL KFPQFVKYAP VIGGSVKGTA LTVTTIGFLK EAPQVNIHGF NVYHKNRLIL PFWQVVSYLD SRGRGVVGIL QADFIEPTHN KQDFERTSLF
501: QKLEGRLKEM TWEYWDTHCT LFGYKDKDKK KLPPRVTSMQ KPLAIEKPVM LNRSCSPVVN TKIEYGNSEQ CSTKLQIRSE QGSHNKRKTH ELVDLQNTEK
601: HARTENVTCV GFSQNKQIIA TPADQVFDRK TMHLVQQNKK LHAKCLEFEK TGEELNLKVT MLKSEIQEAQ DEYKRLLAEV KSLDLKEE

Best Arabidopsis Sequence Match ( AT1G19100.1 )
(BLAST)

001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT

Arabidopsis Description

MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.