Factsheet for Solyc06g071580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81912	Canola	nucleus	23.63	56.57
Solyc01g099300.2.1	Tomato	nucleus	66.72	56.24
VIT_17s0000g08750.t01	Wine grape	nucleus	60.07	50.92
GSMUA_Achr9P25210_001	Banana	cytosol	43.76	50.29
AT1G19100.1	Thale cress	nucleus	54.08	49.02
KRH63565	Soybean	cytosol	55.24	48.26
Bra031063.1-P	Field mustard	nucleus	52.91	47.75
CDY21683	Canola	nucleus	50.92	47.52
CDY41018	Canola	nucleus	51.25	45.29
KRH03266	Soybean	mitochondrion	50.75	45.19
GSMUA_Achr4P13250_001	Banana	cytosol	44.93	43.62
CDX81913	Canola	nucleus	26.96	43.2
Os01t0549200-02	Rice	cytosol, peroxisome, plastid	24.79	41.05
TraesCS3D01G202400.1	Wheat	cytosol	43.76	40.52
Os11t0454800-01	Rice	cytosol	30.45	40.4
TraesCS3B01G231900.1	Wheat	cytosol	43.59	40.37
HORVU3Hr1G046280.3	Barley	cytosol	43.59	40.37
TraesCS3A01G192600.2	Wheat	cytosol	43.59	40.37
EES00907	Sorghum	cytosol	44.09	39.2
Solyc02g084700.2.1	Tomato	cytosol	41.93	39.13
Zm00001d044506_P006	Maize	cytosol	44.09	37.8
TraesCS3B01G359600.1	Wheat	cytosol	43.59	37.22
TraesCS3D01G322900.1	Wheat	plastid	43.93	36.72
TraesCS3A01G329400.1	Wheat	plastid	43.76	36.68
KXG33558	Sorghum	cytosol	44.09	35.96
Zm00001d043191_P005	Maize	cytosol	43.43	35.37
EER87847	Sorghum	plastid	43.09	35.19
Zm00001d012575_P001	Maize	mitochondrion, nucleus	43.59	34.93
HORVU3Hr1G078330.4	Barley	endoplasmic reticulum, plasma membrane	43.93	33.08
HORVU7Hr1G048310.12	Barley	cytosol	45.76	31.39
Solyc03g097520.2.1	Tomato	nucleus	38.6	27.82
OQU76414	Sorghum	cytosol	43.76	27.74
Solyc01g009920.1.1	Tomato	nucleus	35.77	27.71
TraesCS7A01G235300.2	Wheat	nucleus	46.09	27.62
Zm00001d045978_P002	Maize	cytosol	43.76	26.92
Solyc10g081760.1.1	Tomato	nucleus	36.61	26.0
TraesCS7D01G235400.1	Wheat	cytosol	45.26	25.86
TraesCS7B01G133500.2	Wheat	cytosol	44.93	24.64
Solyc02g082290.2.1	Tomato	cytosol	19.63	17.2

Protein Annotations

EnsemblPlants:Solyc06g071580.2.1	EnsemblPlantsGene:Solyc06g071580.2	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:IPR036890
ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF44	PFAM:PF13589	SEG:seg	SUPFAM:SSF55874
UniParc:UPI00027672C2	UniProt:K4C8N0	MapMan:12.5.1.2	:	:	:

Description

No Description!

Coordinates

chr6:+:44069051..44081917

Molecular Weight (calculated)

68361.8 Da

IEP (calculated)

7.215

GRAVY (calculated)

-0.362

Length

601 amino acids

Sequence
(BLAST)

001: MLPEYQASSR RQDVESIGHS GTTLLEKEHS PIDASTLSMS PICPAPLCRQ FWRAGNYDSG LIYKSSSRNG TSFLHVHPKF LHSNATSHKW AFGAIAELLD
101: NAVDEIQNGA TYAIIDKMLN PKDGTSALLI QDDGGGMDQE AMRCCLSFGF SDKKSKSAIG QYGNGFKTSS MRLGADVVVF SRCMKNRKLT QSVGLLSFTF
201: LTRAGLDRIV VPMIEYEFMS ATSKWTSICS EQHFVNNLPL LLQWSPFSTE EELLKQFDSI GDHGTKIIIY NLWLNDEGEM ELDFYSDPED IRISCDAESG
301: KSCSRMSVSD LHLANTLRYS LRAYLSILYL RIPENFCIWL CGKIVEYHNI ASDLKYREFI LYKPQNGGCE EGSIITSIGF LKEAPLVNIH GFSVYYKNRL
401: ILPFWHVVVG FSVNRSRGVV GVLEANFIKP THNKQDFEKT PLFHKLEHRL KEMTWEYWDH HCGLIGYHAT KQLRAPSQDS PQSRKKHATA KRKNCDHQVE
501: PEILKQKVGL SVNLPDPESI QNPHATTITS PLEDQEMVLL LKENKRLHAR CLEIEKEEEE FNAKVALLRK ELKEEQRRYA RLLVQSAVLE NSKREHTVII
601: V

Best Arabidopsis Sequence Match ( AT1G19100.1 )
(BLAST)

001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT

Arabidopsis Description

MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.