Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc01g087650.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36290.1 | Solyc01g087650.2.1 | AT5G11980.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009101 | Potato | plastid | 10.25 | 66.0 |
| VIT_04s0023g02740.t01 | Wine grape | cytosol | 62.42 | 62.71 |
| GSMUA_Achr4P18410_001 | Banana | extracellular | 17.55 | 62.09 |
| GSMUA_Achr4P18400_001 | Banana | cytosol | 19.25 | 60.19 |
| KRH08132 | Soybean | cytosol | 56.21 | 57.46 |
| KRH69835 | Soybean | cytosol | 55.12 | 53.87 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 14.6 | 53.11 |
| AT4G36280.1 | Thale cress | cytosol | 50.93 | 52.4 |
| Zm00001d024625_P002 | Maize | cytosol | 47.36 | 51.69 |
| KXG24418 | Sorghum | cytosol | 47.83 | 51.42 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 48.29 | 51.32 |
| TraesCS1D01G040800.1 | Wheat | cytosol | 47.83 | 51.16 |
| TraesCS7B01G249900.1 | Wheat | cytosol | 48.76 | 50.97 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 48.6 | 50.81 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 48.6 | 50.81 |
| TraesCS1B01G051700.2 | Wheat | cytosol | 47.2 | 50.58 |
| Os10t0181700-01 | Rice | cytosol, plastid | 47.83 | 50.57 |
| AT4G36290.1 | Thale cress | cytosol | 49.69 | 50.39 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 42.39 | 49.82 |
| AT4G36270.1 | Thale cress | cytosol | 37.27 | 49.38 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 46.89 | 48.09 |
| Solyc06g071580.2.1 | Tomato | cytosol | 39.13 | 41.93 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 15.68 | 40.24 |
| Solyc01g099300.2.1 | Tomato | nucleus | 40.53 | 36.61 |
| Solyc03g097520.2.1 | Tomato | nucleus | 39.6 | 30.58 |
| Solyc01g009920.1.1 | Tomato | nucleus | 36.34 | 30.15 |
| Solyc10g081760.1.1 | Tomato | nucleus | 37.73 | 28.72 |
| Bra011676.1-P | Field mustard | cytosol | 51.4 | 25.9 |
| CDX75568 | Canola | cytosol | 51.55 | 24.65 |
| CDX69218 | Canola | cytosol | 51.09 | 24.35 |
| Solyc02g082290.2.1 | Tomato | cytosol | 18.48 | 17.35 |
Protein Annotations
| EnsemblPlants:Solyc02g084700.2.1 | EnsemblPlantsGene:Solyc02g084700.2 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF18 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI0002768C41 | UniProt:K4BAY5 | MapMan:12.5.1.2 | : | : | : |
Description
No Description!
Coordinates
chr2:-:47798406..47812303
Molecular Weight (calculated)
72428.8 Da
IEP (calculated)
7.670
GRAVY (calculated)
-0.528
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPKVEKLPI NVVELDSSDD EGTGVPVVGM TKPEINHGGN SLSKSPVIEN PNAVVPPDSN YRPLDSRSFW RAGNFEVGRI KSSAIHGELE HARVHPKFLH
101: SNATSHKWAF GAIAELLDNA VDEVSSGATF VKIDRISNPR DNSPALLFQD DGGGMDPDRL RKCMSLGYSS KTSNSTIGQY GNGFKTSTMR LGADVIVFSR
201: SSRSGRATQS VGLLSYTFLR RTGQDDVIVP MIDYDITGHW AEPIVYGSQD DWSTNLNTIL EWSPFATKLD LLQQFDDIKS HGTRIIVFNL WLNDEGIYEL
301: NFDDDDEDIT LRDEANHGNT SKTNKRGREL QSHISYRLRY SLRAYTSILY LKKFTNFSII LRGKPVEQYN ILDELKLTKV ITYRPQLAGT SKEILVETSL
401: GFVKDTPSSV CGFNVYHKNR LIRPFWKVTA DGSSKGNGVV GVLEANFIEP AHDKQDFERS SLFFKLETKL KQIVMDYWKG HCHLIGLKPL EPHLQNLLRE
501: SFVPPQVQVA NAQTPSPTKF QTVTDLAAHP RPHLRSAQSG NSRRTNCNME LPGVQPMTGN ATESVKKDTQ ISSSSCMSID QICEENIQLF RRCESFIQRE
601: TELKRTIEEL EKELEDTKKK TSELSTRLES QKKLKLLKQL GQKA
101: SNATSHKWAF GAIAELLDNA VDEVSSGATF VKIDRISNPR DNSPALLFQD DGGGMDPDRL RKCMSLGYSS KTSNSTIGQY GNGFKTSTMR LGADVIVFSR
201: SSRSGRATQS VGLLSYTFLR RTGQDDVIVP MIDYDITGHW AEPIVYGSQD DWSTNLNTIL EWSPFATKLD LLQQFDDIKS HGTRIIVFNL WLNDEGIYEL
301: NFDDDDEDIT LRDEANHGNT SKTNKRGREL QSHISYRLRY SLRAYTSILY LKKFTNFSII LRGKPVEQYN ILDELKLTKV ITYRPQLAGT SKEILVETSL
401: GFVKDTPSSV CGFNVYHKNR LIRPFWKVTA DGSSKGNGVV GVLEANFIEP AHDKQDFERS SLFFKLETKL KQIVMDYWKG HCHLIGLKPL EPHLQNLLRE
501: SFVPPQVQVA NAQTPSPTKF QTVTDLAAHP RPHLRSAQSG NSRRTNCNME LPGVQPMTGN ATESVKKDTQ ISSSSCMSID QICEENIQLF RRCESFIQRE
601: TELKRTIEEL EKELEDTKKK TSELSTRLES QKKLKLLKQL GQKA
001: MAKNYTVADV VNIDSDSDSD DDNGGVIGMV PSLASLIENQ KVSIADAATV APRETLECRS FWKAGENFVI PSSVTLTAIG MVEHARVHPK FLHSNATSHK
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV
Arabidopsis Description
MORC1Protein MICRORCHIDIA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.