Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra006136.1-P | |
| Bra023354.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36290.1 | Bra006136.1-P | AT5G11980.1 | 21798944 |
| AT4G36290.1 | Bra023354.1-P | AT5G11980.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75568 | Canola | cytosol | 92.88 | 88.12 |
| CDX69218 | Canola | cytosol | 91.86 | 86.9 |
| AT4G36290.1 | Thale cress | cytosol | 39.2 | 78.9 |
| GSMUA_Achr4P18410_001 | Banana | extracellular | 8.84 | 62.09 |
| GSMUA_Achr4P18400_001 | Banana | cytosol | 9.31 | 57.77 |
| VIT_04s0023g02740.t01 | Wine grape | cytosol | 27.62 | 55.07 |
| PGSC0003DMT400009101 | Potato | plastid | 4.3 | 55.0 |
| KRH08132 | Soybean | cytosol | 26.53 | 53.81 |
| Os10t0181700-01 | Rice | cytosol, plastid | 24.96 | 52.38 |
| Solyc02g084700.2.1 | Tomato | cytosol | 25.9 | 51.4 |
| Zm00001d024625_P002 | Maize | cytosol | 23.71 | 51.36 |
| KXG24418 | Sorghum | cytosol | 23.94 | 51.09 |
| KRH69835 | Soybean | cytosol | 26.29 | 50.99 |
| TraesCS1D01G040800.1 | Wheat | cytosol | 23.94 | 50.83 |
| TraesCS1B01G051700.2 | Wheat | cytosol | 23.87 | 50.75 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 21.6 | 50.37 |
| TraesCS7B01G249900.1 | Wheat | cytosol | 24.02 | 49.84 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 23.87 | 49.51 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 23.87 | 49.51 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 23.4 | 49.34 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 23.55 | 47.93 |
| Bra031063.1-P | Field mustard | nucleus | 20.19 | 38.74 |
| Bra019199.1-P | Field mustard | cytosol | 17.76 | 32.61 |
| Bra013851.1-P | Field mustard | nucleus | 17.61 | 32.37 |
| Bra022762.1-P | Field mustard | nucleus | 18.08 | 30.43 |
| Bra016690.1-P | Field mustard | plastid | 16.74 | 26.13 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 11.03 | 22.67 |
Protein Annotations
| EnsemblPlants:Bra011676.1 | EnsemblPlants:Bra011676.1-P | EnsemblPlantsGene:Bra011676 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
| InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF18 | PFAM:PF13589 | SEG:seg |
| SUPFAM:SSF55874 | UniParc:UPI0002546B9B | UniProt:M4D5B9 | MapMan:12.5.1.2 | : | : |
Description
AT4G36290 (E=2e-209) | ATP-binding region, ATPase-like domain-containing protein
Coordinates
chrA01:+:1109894..1117580
Molecular Weight (calculated)
142087.0 Da
IEP (calculated)
6.460
GRAVY (calculated)
-0.412
Length
1278 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKRTVADVV LLSDSDDEDI GVVRRGGGGG AFRRRSASLM ENRQVSSAIA DTTVTRRETL ECRSFWKAGD NFVIPRAVTP TAPGMLEHAR VHPKFLHSNA
0101: TSHKWAFGAI AELLDNAVDE IQNGATFVKI DKIDIAKDNS PALVFQDDGA GMDPDGIRKC MSLGYSSKKS NTTIGQYGNG FKTSTMRLGA DAIVFTRSTR
0201: GGKSTQSIGL LSYTFLRRTG QDDVVVPMID IDISSDLPQP IIYGTPEDWS TNLNILLKWS PFSTEDELLQ QFEDIGTHGT KVMIYNLWLN DEGVYELSFD
0301: DEDEDIRLRD ENALTRKGVV AVTLELRSHI SYRFRYSLKA YISMLYLKKF KNFKIILRGI PVEQFNIADE LRYPETIMYK PHAAAVGYAV TEIKVGFVKE
0401: APKLPVCGFN VYHKNRLIMP FWRVTLSGST SGNGVVGVLE ANFIEPAHDK QDFERSSLFQ RLEARLKKIT LDYWKSRSEA VGYHPDSRAH KLKRTATPDQ
0501: PPGDDTFNPS PFPSDKISQG GPLIREISLS KGTSSRAHKS KRTATPDQPP REDTFNPSPL PSDKTSQGGL IIREISFSKG TSSRTVALPP PHMRNFTGVR
0601: SNFQPVQLNP QPVQLNPQPV QLNTQPVQLN PQPVQLNPQP AATESGDNLG GETAYKLSEE NIQLFLECEE YAKKETEMEQ MVSFIPQCKH MFVTLVSNMD
0701: TNETGKELRK GTGRSQNIES NDADLNSLVA SSSEMSHNAK TVVAADVVHL DSDDDDDVGG GGGGRGLSLI ETPQVPSTTA NATVAPLETL ECRSFWKAGE
0801: SYVTPNVVSQ AAPGMLEHAR VHPKFLHSNA TSHKWAFGAI AELLDNAVDE IQNGATFVKI DKIDIAKNNS PALVFQDDGA GMDPNGIRKC MSLGYSSKKS
0901: NTTIGQYGNG FKTSTMRLGA DAIVFSRSTR SGKATQSVGL LSYTFLRRTG QDDVIVPMVK SSAFVDFAVI PEINYSLFSS YILYAIQIDI DISKERPQPI
1001: IYGSSEDWST NLDILLKWSP FSTKDELFQQ FDDIGTHGTK VIIYNLWLND EGIYELSFDD DDEAYTSMLY LEKFKNFKII LRGIPVKQFN IADEFRYPEI
1101: IKYRPQIATI EQATTEIKVG FIKEAPKLPV CGYNVYHKNR LIRPFWKVTM DGSALGNGVV GGPVIREINI SNATSVRTVA APPPHMRNST GVRNNFQPVQ
1201: LTPQPAVTDT RNKHVGKSVE EISQENIQLF MKCEEYVKKE TEMEQTVRNL EKELEEAKSK CAQLAMLVDA KKKEMQQV
0101: TSHKWAFGAI AELLDNAVDE IQNGATFVKI DKIDIAKDNS PALVFQDDGA GMDPDGIRKC MSLGYSSKKS NTTIGQYGNG FKTSTMRLGA DAIVFTRSTR
0201: GGKSTQSIGL LSYTFLRRTG QDDVVVPMID IDISSDLPQP IIYGTPEDWS TNLNILLKWS PFSTEDELLQ QFEDIGTHGT KVMIYNLWLN DEGVYELSFD
0301: DEDEDIRLRD ENALTRKGVV AVTLELRSHI SYRFRYSLKA YISMLYLKKF KNFKIILRGI PVEQFNIADE LRYPETIMYK PHAAAVGYAV TEIKVGFVKE
0401: APKLPVCGFN VYHKNRLIMP FWRVTLSGST SGNGVVGVLE ANFIEPAHDK QDFERSSLFQ RLEARLKKIT LDYWKSRSEA VGYHPDSRAH KLKRTATPDQ
0501: PPGDDTFNPS PFPSDKISQG GPLIREISLS KGTSSRAHKS KRTATPDQPP REDTFNPSPL PSDKTSQGGL IIREISFSKG TSSRTVALPP PHMRNFTGVR
0601: SNFQPVQLNP QPVQLNPQPV QLNTQPVQLN PQPVQLNPQP AATESGDNLG GETAYKLSEE NIQLFLECEE YAKKETEMEQ MVSFIPQCKH MFVTLVSNMD
0701: TNETGKELRK GTGRSQNIES NDADLNSLVA SSSEMSHNAK TVVAADVVHL DSDDDDDVGG GGGGRGLSLI ETPQVPSTTA NATVAPLETL ECRSFWKAGE
0801: SYVTPNVVSQ AAPGMLEHAR VHPKFLHSNA TSHKWAFGAI AELLDNAVDE IQNGATFVKI DKIDIAKNNS PALVFQDDGA GMDPNGIRKC MSLGYSSKKS
0901: NTTIGQYGNG FKTSTMRLGA DAIVFSRSTR SGKATQSVGL LSYTFLRRTG QDDVIVPMVK SSAFVDFAVI PEINYSLFSS YILYAIQIDI DISKERPQPI
1001: IYGSSEDWST NLDILLKWSP FSTKDELFQQ FDDIGTHGTK VIIYNLWLND EGIYELSFDD DDEAYTSMLY LEKFKNFKII LRGIPVKQFN IADEFRYPEI
1101: IKYRPQIATI EQATTEIKVG FIKEAPKLPV CGYNVYHKNR LIRPFWKVTM DGSALGNGVV GGPVIREINI SNATSVRTVA APPPHMRNST GVRNNFQPVQ
1201: LTPQPAVTDT RNKHVGKSVE EISQENIQLF MKCEEYVKKE TEMEQTVRNL EKELEEAKSK CAQLAMLVDA KKKEMQQV
001: MAKNYTVADV VNIDSDSDSD DDNGGVIGMV PSLASLIENQ KVSIADAATV APRETLECRS FWKAGENFVI PSSVTLTAIG MVEHARVHPK FLHSNATSHK
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV
Arabidopsis Description
MORC1Protein MICRORCHIDIA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.