CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH07953
KRH69706

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36290.1	KRH07953	AT5G11980.1	21798944
AT4G36290.1	KRH69706	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69835	Soybean	cytosol	92.22	88.16
GSMUA_Achr4P18410_001	Banana	extracellular	18.57	64.29
GSMUA_Achr4P18400_001	Banana	cytosol	20.63	63.11
VIT_04s0023g02740.t01	Wine grape	cytosol	62.22	61.15
Solyc02g084700.2.1	Tomato	cytosol	57.46	56.21
PGSC0003DMT400009101	Potato	plastid	8.57	54.0
AT4G36280.1	Thale cress	cytosol	53.33	53.67
AT4G36290.1	Thale cress	cytosol	53.81	53.39
CDY59688	Canola	golgi, plasma membrane, plastid	14.92	53.11
TraesCS1A01G039200.1	Wheat	cytosol	44.29	50.91
TraesCS1D01G040800.1	Wheat	cytosol	48.57	50.83
Zm00001d024625_P002	Maize	cytosol	47.46	50.68
TraesCS1B01G051700.2	Wheat	cytosol	48.25	50.58
AT4G36270.1	Thale cress	cytosol	38.73	50.21
KXG24418	Sorghum	cytosol	47.14	49.58
Os10t0181700-01	Rice	cytosol, plastid	47.78	49.43
HORVU7Hr1G083280.20	Barley	cytosol	47.3	49.17
TraesCS7B01G249900.1	Wheat	cytosol	47.94	49.03
TraesCS7A01G338600.1	Wheat	cytosol, plastid	47.94	49.03
TraesCS7D01G345800.1	Wheat	cytosol	47.62	48.7
HORVU1Hr1G006770.6	Barley	cytosol	48.41	48.57
CDY59720	Canola	endoplasmic reticulum, extracellular	15.71	39.44
KRH03266	Soybean	mitochondrion	40.0	37.33
KRH63565	Soybean	cytosol	40.0	36.63
KRH41106	Soybean	nucleus	39.05	30.0
KRH59787	Soybean	nucleus	37.94	28.93
Bra011676.1-P	Field mustard	cytosol	53.81	26.53
CDX75568	Canola	cytosol	53.33	24.94
CDX69218	Canola	cytosol	53.33	24.87
KRH76501	Soybean	cytosol	20.32	18.63

Protein Annotations

EMBL:ACUP02010146	EnsemblPlants:KRH08132	EnsemblPlantsGene:GLYMA_16G131900	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:IPR036890	ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF18	PFAM:PF13589	ProteinID:KRH08132
ProteinID:KRH08132.1	SEG:seg	SUPFAM:SSF55874	UniParc:UPI000294A379	UniProt:K7MH31	MapMan:12.5.1.2

Description

hypothetical protein

Coordinates

chr16:+:28752385..28796810

Molecular Weight (calculated)

70548.9 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.394

Length

630 amino acids

Sequence
(BLAST)

001: MSLLPKTEQN DVPVVDIDSD ENGVAAVAPA KNDASSHKTP SPQVELVQQE TPASGSALSA SDGLSRSFWK AGDYVVGPSS KPTPFQGHLE HARVHPKFLH
101: SNATSHKWAF GAIAELVDNA VDEIQNGATF VKIDKFDVKK DNSPALCFLD DGGGMNPNAI RKCMSLGYSS KKSKTTIGQY GNGFKTSTMR LGADVIVFSR
201: AMHSGRATQS VGLLSYTFLR RTGQDDVVVP MIDFDISGHW AEPIIYSSQD EWSANLKTIL DWSPFTSKEE LMLQFDDIGS HGTKVVIYNL WLNDEGIYEL
301: SFDDDAEDIM LRDEANHGAE KNLRKKTVQL QSHISYRLRF SLRAYVSMLY LRKFSNFSII LRGKLVDQFN IADDLIYSKV IPYKPQLAMA TNEAIAETKT
401: TIGFIKEAAE IKVTGFNVYH KNRLIKPFWK VVADGSSKGR CVVGVLEANF IEPAHDKQDF ERSVLFIRLE NKLKQMTMDY WRDHCHLIGY QPLNFKSQKN
501: VVKEAHIRKS AQHSINPQNQ LLADQQDTSL VAEHQSDLSQ PIVGLAVIGM QGSSREQLGT MLETPVSVSP DEICAENIKL FERCEEYREK ETELKQTVVD
601: LEEELKQIKK KCDLLSSLLE TKRKAKSVKG

Best Arabidopsis Sequence Match ( AT4G36290.1 )
(BLAST)

001: MAKNYTVADV VNIDSDSDSD DDNGGVIGMV PSLASLIENQ KVSIADAATV APRETLECRS FWKAGENFVI PSSVTLTAIG MVEHARVHPK FLHSNATSHK
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV

Arabidopsis Description

MORC1Protein MICRORCHIDIA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.