Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU5Hr1G025740.13 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36290.1 | HORVU5Hr1G025740.13 | AT5G11980.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G249900.1 | Wheat | cytosol | 96.53 | 94.97 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 96.2 | 94.64 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 95.38 | 93.83 |
| Os10t0181700-01 | Rice | cytosol, plastid | 81.35 | 80.95 |
| KXG24418 | Sorghum | cytosol | 78.71 | 79.63 |
| Zm00001d024625_P002 | Maize | cytosol | 76.73 | 78.81 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 80.36 | 77.55 |
| GSMUA_Achr4P18410_001 | Banana | extracellular | 22.28 | 74.18 |
| GSMUA_Achr4P18400_001 | Banana | cytosol | 24.42 | 71.84 |
| PGSC0003DMT400009101 | Potato | plastid | 8.42 | 51.0 |
| VIT_04s0023g02740.t01 | Wine grape | cytosol | 52.81 | 49.92 |
| Solyc02g084700.2.1 | Tomato | cytosol | 51.32 | 48.29 |
| KRH08132 | Soybean | cytosol | 49.17 | 47.3 |
| AT4G36280.1 | Thale cress | cytosol | 48.51 | 46.96 |
| AT4G36290.1 | Thale cress | cytosol | 48.02 | 45.83 |
| AT4G36270.1 | Thale cress | cytosol | 35.97 | 44.86 |
| KRH69835 | Soybean | cytosol | 48.35 | 44.46 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 12.87 | 44.07 |
| HORVU3Hr1G046280.3 | Barley | cytosol | 38.45 | 35.9 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 14.69 | 35.46 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 40.43 | 30.47 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 39.27 | 29.82 |
| HORVU7Hr1G048310.12 | Barley | cytosol | 38.45 | 26.6 |
| Bra011676.1-P | Field mustard | cytosol | 49.34 | 23.4 |
| CDX75568 | Canola | cytosol | 49.17 | 22.12 |
| CDX69218 | Canola | cytosol | 48.84 | 21.91 |
| HORVU1Hr1G080470.5 | Barley | cytosol | 19.31 | 15.18 |
| HORVU7Hr1G093640.3 | Barley | cytosol | 7.43 | 12.89 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G083280.20 | EnsemblPlantsGene:HORVU7Hr1G083280 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI000B463119 | UniProt:A0A287X4H2 | MapMan:12.5.1.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:501983094..502005113
Molecular Weight (calculated)
67804.8 Da
IEP (calculated)
6.621
GRAVY (calculated)
-0.358
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAAMAGGDG GMGSGPRSLD CRSFWKAGAF EAPSAAAREF YDVLETGDFD RARVHPKFLH TNATSHKWAF GAIAELLDNA VDEVICNGAT FIKVDKSINL
101: KDSSPMLVFQ DDGGGMDPEG VRQCISLGFS TKKSKTTIGQ YGNGFKTSTM RLGADAIVFT RAIRGSNVTL SVGLLSYTFL RRTMKDDIVV PVLDFQIQDG
201: HIVPLVYGSQ GDWDSSLKII LDWSPFSSME ELLQQFKDIE SHGTKVVIYD LWMNDDGLLE LDFDDDDEDI LLRDQAKATA GTTKIQKEII EQHISHRLRF
301: SLRAYTSILY LKKYANFQII LRGKVVEHIS VAHDLKFKKV FTYKPQVTHD SQVVSVKVDV GFAKEAPVLG IFGMNVYHKN RLIMPFWKVL QEGSSRGRSV
401: VGVLEANFIE PAHDKQDFER TPLFIRLETK LRQIIIEYWK NNCHLIGYQP MNPQLKTQYK AAKAPGGPGH QFQKKSSTAQ RIGAHSSNLL PETYDDTAVF
501: GLSANGAGSG LQFSGRAQEK STNSAGLEED LVNIASDGEL DPNVIEKLSD ENISLFTRRE ELKQRDTQLK QTILELEHEL EETKRKCSQL STELQVRKSQ
601: QQLPYM
101: KDSSPMLVFQ DDGGGMDPEG VRQCISLGFS TKKSKTTIGQ YGNGFKTSTM RLGADAIVFT RAIRGSNVTL SVGLLSYTFL RRTMKDDIVV PVLDFQIQDG
201: HIVPLVYGSQ GDWDSSLKII LDWSPFSSME ELLQQFKDIE SHGTKVVIYD LWMNDDGLLE LDFDDDDEDI LLRDQAKATA GTTKIQKEII EQHISHRLRF
301: SLRAYTSILY LKKYANFQII LRGKVVEHIS VAHDLKFKKV FTYKPQVTHD SQVVSVKVDV GFAKEAPVLG IFGMNVYHKN RLIMPFWKVL QEGSSRGRSV
401: VGVLEANFIE PAHDKQDFER TPLFIRLETK LRQIIIEYWK NNCHLIGYQP MNPQLKTQYK AAKAPGGPGH QFQKKSSTAQ RIGAHSSNLL PETYDDTAVF
501: GLSANGAGSG LQFSGRAQEK STNSAGLEED LVNIASDGEL DPNVIEKLSD ENISLFTRRE ELKQRDTQLK QTILELEHEL EETKRKCSQL STELQVRKSQ
601: QQLPYM
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.