Factsheet for TraesCS7B01G249900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G095100.1
TraesCS5B01G101300.1
TraesCS5D01G107800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36290.1	TraesCS5A01G095100.1	AT5G11980.1	21798944
AT4G36290.1	TraesCS5B01G101300.1	AT5G11980.1	21798944
AT4G36290.1	TraesCS5D01G107800.1	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G345800.1	Wheat	cytosol	98.38	98.38
TraesCS7A01G338600.1	Wheat	cytosol, plastid	97.24	97.24
HORVU7Hr1G083280.20	Barley	cytosol	94.97	96.53
TraesCS1B01G051700.2	Wheat	cytosol	79.87	81.86
Os10t0181700-01	Rice	cytosol, plastid	80.19	81.12
KXG24418	Sorghum	cytosol	77.6	79.8
Zm00001d024625_P002	Maize	cytosol	75.65	78.98
GSMUA_Achr4P18410_001	Banana	extracellular	22.08	74.73
GSMUA_Achr4P18400_001	Banana	cytosol	24.19	72.33
PGSC0003DMT400009101	Potato	plastid	8.44	52.0
VIT_04s0023g02740.t01	Wine grape	cytosol	51.95	49.92
Solyc02g084700.2.1	Tomato	cytosol	50.97	48.76
KRH08132	Soybean	cytosol	49.03	47.94
AT4G36280.1	Thale cress	cytosol	48.54	47.76
AT4G36290.1	Thale cress	cytosol	48.05	46.61
AT4G36270.1	Thale cress	cytosol	36.04	45.68
KRH69835	Soybean	cytosol	48.21	45.07
CDY59688	Canola	golgi, plasma membrane, plastid	12.5	43.5
TraesCS3B01G231900.1	Wheat	cytosol	38.47	36.52
CDY59720	Canola	endoplasmic reticulum, extracellular	14.45	35.46
TraesCS3B01G359600.1	Wheat	cytosol	38.47	33.66
TraesCS2B01G291200.1	Wheat	nucleus	40.42	31.56
Bra011676.1-P	Field mustard	cytosol	49.84	24.02
CDX75568	Canola	cytosol	49.68	22.72
CDX69218	Canola	cytosol	49.19	22.43
TraesCS7B01G133500.2	Wheat	cytosol	38.64	21.72
TraesCS7B01G299600.1	Wheat	cytosol	18.83	15.26

Protein Annotations

EnsemblPlants:TraesCS7B01G249900.1	EnsemblPlantsGene:TraesCS7B01G249900	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:IPR036890
ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF46	PFAM:PF13589	SEG:seg	SUPFAM:SSF55874
TIGR:cd00075	MapMan:12.5.1.2	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:461216161..461230805

Molecular Weight (calculated)

69073.2 Da

IEP (calculated)

6.702

GRAVY (calculated)

-0.392

Length

616 amino acids

Sequence
(BLAST)

001: MPAAMAGGSG GMGSGPRSLD CRSFWKAGAF EAPSAAAREF HDVLETGDFD RARVHPKFLH TNATSHKWAF GAIAELLDNA VDEICNGATF VKVDKSINLK
101: DSSPMLVFQD DGGGMDPEGV RQCMSLGFST KKSKTTIGQY GNGFKTSTMR LGADAIVFTR AIRGSNVTLS VGLLSYTFLR RTMKDDIVVP VLDFQIQDDH
201: IVPLMYGSQG DWDSSLKIIL DWSPFSSMEE LLQQFKDIKS HGTKVVIYDL WMNDDGLLEL DFDDDDEDIL LRDQAKATAG TTKIQKEIIE QHISHRLRFS
301: LRAYTSILYL KKYANFQIIL RGKVVEHINI AHDLKFKKIF TYKPQVTHDS QVVSVKVDVG FAKEAPVLGI FGMNVYHKNR LIMPFWKVLQ EGSSRGRSVV
401: GVLEANFIEP AHDKQDFERT PLFIRLETKL RQIIIEYWKN NCHLIGYQPM NPQLKTQYKA AERSGGPGHQ FQQKSSTAQR IGAHSSLTAQ RIGAHSSNLL
501: PETYDDAAVF GLRTNGAGSG LQFSGQAQEN STNSAGLEED LVNIASDGEL DPNFIEKLSD ENISLFTRRE ELKQRDTQLK QTILELEHEL EETKRKCSQL
601: STELQVRKSQ QQLPYM

Best Arabidopsis Sequence Match ( AT4G36290.1 )
(BLAST)

001: MAKNYTVADV VNIDSDSDSD DDNGGVIGMV PSLASLIENQ KVSIADAATV APRETLECRS FWKAGENFVI PSSVTLTAIG MVEHARVHPK FLHSNATSHK
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV

Arabidopsis Description

MORC1Protein MICRORCHIDIA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.