Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr3P32460_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36290.1 | GSMUA_Achr3P32460_001 | AT5G11980.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0181700-01 | Rice | cytosol, plastid | 77.67 | 26.27 |
| TraesCS1D01G040800.1 | Wheat | cytosol | 76.21 | 26.08 |
| TraesCS1B01G051700.2 | Wheat | cytosol | 75.73 | 25.96 |
| Zm00001d024625_P002 | Maize | cytosol | 74.27 | 25.93 |
| KXG24418 | Sorghum | cytosol | 73.79 | 25.38 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 76.21 | 25.0 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 71.84 | 24.42 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 72.33 | 24.19 |
| TraesCS7B01G249900.1 | Wheat | cytosol | 72.33 | 24.19 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 72.33 | 24.19 |
| AT4G36270.1 | Thale cress | cytosol | 53.88 | 22.84 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 58.74 | 22.08 |
| VIT_04s0023g02740.t01 | Wine grape | cytosol | 65.53 | 21.06 |
| KRH08132 | Soybean | cytosol | 63.11 | 20.63 |
| AT4G36280.1 | Thale cress | cytosol | 60.68 | 19.97 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 24.27 | 19.92 |
| KRH69835 | Soybean | cytosol | 62.14 | 19.42 |
| AT4G36290.1 | Thale cress | cytosol | 59.71 | 19.37 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 49.03 | 19.31 |
| Solyc02g084700.2.1 | Tomato | cytosol | 60.19 | 19.25 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 15.05 | 17.51 |
| GSMUA_Achr4P13250_001 | Banana | cytosol | 46.12 | 15.35 |
| GSMUA_Achr11P... | Banana | nucleus | 49.03 | 12.21 |
| Bra011676.1-P | Field mustard | cytosol | 57.77 | 9.31 |
| PGSC0003DMT400009101 | Potato | plastid | 4.37 | 9.0 |
| CDX69218 | Canola | cytosol | 57.28 | 8.73 |
| CDX75568 | Canola | cytosol | 56.8 | 8.69 |
| GSMUA_Achr1P16580_001 | Banana | cytosol, nucleus, peroxisome | 22.82 | 7.3 |
| GSMUA_Achr4P18410_001 | Banana | extracellular | 1.46 | 1.65 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P18400_001 | EnsemblPlants:GSMUA_Achr4T18400_001 | EnsemblPlantsGene:GSMUA_Achr4G18400_001 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | SEG:seg |
| UniParc:UPI00029533D2 | UniProt:M0SQ03 | MapMan:12.5.1.2 | : | : | : |
Description
Putative MORC family CW-type zinc finger protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G18400_001]
Coordinates
chr4:-:19202516..19225774
Molecular Weight (calculated)
24033.1 Da
IEP (calculated)
6.361
GRAVY (calculated)
-0.162
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQFEDIGLH GTKVLIYNLW MNDDGLLELD FEDDEEDILL RDQAYSGGFS RSNKEIVHCH ISYTLKYSLR AYASILYLRK FSSFQIILRG KPVEQVNLAD
101: EMKFMKTITY KPQVCKDAED VSVRVTIGFA KEAPVLGIFG FNVYHKNRLI MPFWKVVQEG SSRGRCVIGV FEANFMEPAH DKQDFERTPL FIRLEAKLRQ
201: IVLDYW
101: EMKFMKTITY KPQVCKDAED VSVRVTIGFA KEAPVLGIFG FNVYHKNRLI MPFWKVVQEG SSRGRCVIGV FEANFMEPAH DKQDFERTPL FIRLEAKLRQ
201: IVLDYW
001: MPPMAKNAAV TDVVHLDSDS DSDNGVVGGR ESASTIAGAA TMAPRETLEC RSFWKAGDYF VIPNVVTPTA PGMLEHARVH PRFLHSNATS HKWAFGAIAE
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
Arabidopsis Description
MORC2Protein MICRORCHIDIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5FV35]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.