CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92716

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36290.1	EER92716	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024625_P002	Maize	cytosol	93.66	95.08
Os10t0181700-01	Rice	cytosol, plastid	83.31	81.94
TraesCS1D01G040800.1	Wheat	cytosol	80.3	79.9
TraesCS1A01G039200.1	Wheat	cytosol	72.95	79.74
TraesCS1B01G051700.2	Wheat	cytosol	79.8	79.53
HORVU7Hr1G083280.20	Barley	cytosol	79.63	78.71
TraesCS7B01G249900.1	Wheat	cytosol	79.8	77.6
TraesCS7D01G345800.1	Wheat	cytosol	79.63	77.44
TraesCS7A01G338600.1	Wheat	cytosol, plastid	79.3	77.11
HORVU1Hr1G006770.6	Barley	cytosol	80.47	76.75
GSMUA_Achr4P18410_001	Banana	extracellular	22.7	74.73
GSMUA_Achr4P18400_001	Banana	cytosol	25.38	73.79
PGSC0003DMT400009101	Potato	plastid	8.51	51.0
VIT_04s0023g02740.t01	Wine grape	cytosol	53.26	49.77
Solyc02g084700.2.1	Tomato	cytosol	51.42	47.83
AT4G36280.1	Thale cress	cytosol	49.92	47.76
KRH08132	Soybean	cytosol	49.58	47.14
AT4G36290.1	Thale cress	cytosol	49.75	46.93
AT4G36270.1	Thale cress	cytosol	37.73	46.5
KRH69835	Soybean	cytosol	49.58	45.07
CDY59688	Canola	golgi, plasma membrane, plastid	13.19	44.63
EES00907	Sorghum	cytosol	42.07	37.28
CDY59720	Canola	endoplasmic reticulum, extracellular	15.03	35.86
KXG33558	Sorghum	cytosol	40.23	32.7
EER87847	Sorghum	plastid	39.07	31.79
EES10563	Sorghum	nucleus	41.07	31.22
KXG30181	Sorghum	nucleus	38.4	28.57
Bra011676.1-P	Field mustard	cytosol	51.09	23.94
OQU76414	Sorghum	cytosol	37.73	23.84
CDX75568	Canola	cytosol	50.92	22.64
CDX69218	Canola	cytosol	50.58	22.43
KXG20380	Sorghum	cytosol	18.53	14.07

Protein Annotations

EnsemblPlants:KXG24418	EnsemblPlantsGene:SORBI_3007G039300	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:IPR036890
ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF46	PFAM:PF13589	ProteinID:KXG24418	ProteinID:KXG24418.1
SEG:seg	SUPFAM:SSF55874	UniParc:UPI0003C6F616	UniProt:A0A1B6PFF1	MapMan:12.5.1.2	:

Description

hypothetical protein

Coordinates

chr7:-:3793836..3805460

Molecular Weight (calculated)

66949.5 Da

IEP (calculated)

6.362

GRAVY (calculated)

-0.435

Length

599 amino acids

Sequence
(BLAST)

001: MPLAMDGGGG GGGRALDCRS FWKAGAYEAP TAPTREFQDA LETGDFDRAR VHPKFLHTNA TSHKWAFGAI AELLDNAVDE RSNGATFIKV DKSINLKDNS
101: SMIVFQDDGG GMDPEGVRRC MSLGFSTKKS KTTIGQYGNG FKTSTMRLGA DAIVFTRAIR GSNVTLSIGL LSYTFLRKTM KDDIVVPMLD FKIQDGDIVP
201: LVYGSQGDWD SSLKIILDWS PFSSKEELLQ QFQDVGSHGT KVIVYNLWMN DDGLLELDFE DDDEDILLRD QGSASGGFSK SQKEIVMQHI SHRLRFSLRA
301: YTSILYLRKF DNFQIILRGK PVEQLFITEE LKFKKVVTYK PQAAHDSQVA PVKIDVGFAK EAPILGIFGM NVYHKDRLIM PFWKVLQEGS SRGRSVVGVL
401: EANFIEPAHD KQDFERTPLF IRLEARLRQI IIDFWKERCH LIGYQPLDPQ LRSQYKATLK DSGGPGTQVH HKASSARRTG GLSSNLLPDT YDDITTVGLA
501: NNGSHSQSSG QAQENNMESE GLDEDLVEIG SSGVLDPNFI EKLSEENIAL FSRREELRQR DTQLKQTIGG LEHELEETKK KCGQLAAQLK AWKNQQHLP

Best Arabidopsis Sequence Match ( AT4G36290.1 )
(BLAST)

001: MAKNYTVADV VNIDSDSDSD DDNGGVIGMV PSLASLIENQ KVSIADAATV APRETLECRS FWKAGENFVI PSSVTLTAIG MVEHARVHPK FLHSNATSHK
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV

Arabidopsis Description

MORC1Protein MICRORCHIDIA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.