CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053269_P001	Maize	cytosol	28.82	88.89
Zm00001d053268_P001	Maize	cytosol	44.72	68.44
Os02t0469300-02	Rice	nucleus	63.35	63.51
EES10563	Sorghum	nucleus	57.52	58.76
CDY03400	Canola	nucleus	43.23	51.71
GSMUA_Achr11P...	Banana	nucleus	53.04	51.63
CDY34330	Canola	nucleus	43.35	51.63
CDX71661	Canola	cytosol	10.43	50.91
Bra019199.1-P	Field mustard	cytosol	43.85	50.72
CDY11045	Canola	nucleus	43.73	50.5
Bra013851.1-P	Field mustard	nucleus	43.48	50.36
CDX92664	Canola	nucleus	43.23	50.29
AT4G24970.1	Thale cress	nucleus	42.73	48.66
CDX84876	Canola	nucleus	44.72	47.49
Bra022762.1-P	Field mustard	nucleus	44.47	47.17
KRH41106	Soybean	nucleus	47.83	46.95
PGSC0003DMT400088594	Potato	nucleus	43.35	46.78
CDY45818	Canola	nucleus	44.84	46.58
KRH59787	Soybean	nucleus	47.7	46.49
VIT_17s0000g00910.t01	Wine grape	nucleus	46.83	45.42
Solyc03g097520.2.1	Tomato	nucleus	46.83	45.2
Solyc01g009920.1.1	Tomato	nucleus	42.73	44.33
AT5G50780.1	Thale cress	nucleus	44.35	43.59
AT5G13130.1	Thale cress	nucleus	38.26	43.5
CDY52039	Canola	plastid	37.02	43.38
CDX84021	Canola	plastid	36.52	42.61
Solyc10g081760.1.1	Tomato	nucleus	43.35	41.25
KXG24418	Sorghum	cytosol	28.57	38.4
CDX97228	Canola	nucleus, plastid	38.76	37.59
CDX69668	Canola	nucleus, plastid	38.51	37.26
Bra016690.1-P	Field mustard	plastid	37.02	36.39
PGSC0003DMT400072308	Potato	nucleus	42.36	36.2
EES00907	Sorghum	cytosol	28.82	34.32
Bra008854.1-P	Field mustard	nucleus, plastid	25.96	33.6
VIT_13s0147g00080.t01	Wine grape	cytosol	16.77	33.5
KXG33558	Sorghum	cytosol	28.45	31.07
EER87847	Sorghum	plastid	28.32	30.98
OQU76414	Sorghum	cytosol	29.32	24.89
KXG20380	Sorghum	cytosol	15.53	15.84

Protein Annotations

EnsemblPlants:KXG30181	EnsemblPlantsGene:SORBI_3004G142400	Gene3D:3.30.565.10	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:IPR036890
ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF21	PFAM:PF13589	ProteinID:KXG30181	ProteinID:KXG30181.1
SEG:seg	SUPFAM:SSF55874	UniParc:UPI0007F23338	UniProt:A0A194YPR0	MapMan:12.5.1.2	:

Description

hypothetical protein

Coordinates

chr4:+:42125144..42147835

Molecular Weight (calculated)

89882.9 Da

IEP (calculated)

9.785

GRAVY (calculated)

-0.674

Length

805 amino acids

Sequence
(BLAST)

001: MAPTAVDPGP TGHLLAPAAA PVVVAGGGDG GDGPLEVVIN VSSSDTDSDA PGAGAGKRSR PVAGRGGGRD REEKKARILA AAATVPAGFL EPLPPPPRVK
101: LLPPPAPGRS VTKQFWKAGD YVGKSDHLLA VEHSDSGMDH VRVHPKFLHS NATSHKWALG AFAELLDNSL DEVVNGATYV HIDMMESKKD GTRMLLVEDN
201: GGGMNPDKMR HCMSLGYSAK SKVKNTIGQY GNGFKTSTMR LGADVLVFSR SRGIKGTRPT QSVGMLSYTF LRSTNKEDII VPMIDYEKEK EWKRKARTTL
301: TDWCMSLETI IQWSPYSTEA ELIQEFGSIG EQGTRIIIYN LWEDDEGELE LDFDADANDI QIRGVNRDQN KIQKANQFPN SRHFFTYRHS LRSYASILYL
401: RLPDNFKMIL RGKKIEHHNI INDLMLKKQL NYKPTVCDGL PKDMHMAAKV TIGFVKDARQ HIDIQGFNVY HKNRLIKPFW RVWTAAGSGG RGIIGVLEVN
501: FVEPAHDKQD FERTNCLARL EARLNRMQKK YWSDNRHRIG YGTNDASTDS GKGERGLSPR PYGIGSRKSG YLQRIRSADR TSSKTISQQS AEKSANTIRP
601: ERSVLHGLSN TGGGNTEIAS APSRSTSPIL RTPEKSFRKV NTSSPPSPSG VKRSERIALK YQSKELNVIL SNKKEVNVAT NGDRESIVDP EAVIKKLKEK
701: NSSLEERIFM VQESLSRELQ IEQDKNKSLT ERIEDVERQL ELAINEQEAT VELFAEERKR RDQEEENLKM KLREASSTIQ DLMEQLNAAR NCCKRKQQTK
801: QLHPQ

Best Arabidopsis Sequence Match ( AT5G50780.2 )
(BLAST)

001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR

Arabidopsis Description

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.