Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84876 | Canola | nucleus | 94.06 | 96.17 |
| AT5G50780.1 | Thale cress | nucleus | 73.55 | 69.6 |
| CDY03400 | Canola | nucleus | 58.58 | 67.46 |
| CDY34330 | Canola | nucleus | 58.45 | 67.01 |
| CDX92664 | Canola | nucleus | 58.19 | 65.17 |
| CDY11045 | Canola | nucleus | 58.32 | 64.85 |
| CDX71661 | Canola | cytosol | 12.52 | 58.79 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 58.06 | 54.22 |
| KRH41106 | Soybean | nucleus | 55.23 | 52.2 |
| Solyc03g097520.2.1 | Tomato | nucleus | 55.74 | 51.8 |
| KRH59787 | Soybean | nucleus | 54.97 | 51.57 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 50.71 | 49.81 |
| EES10563 | Sorghum | nucleus | 50.45 | 49.62 |
| Zm00001d004118_P003 | Maize | nucleus | 50.71 | 49.25 |
| Zm00001d053269_P001 | Maize | cytosol | 16.52 | 49.04 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 49.94 | 47.96 |
| GSMUA_Achr11P... | Banana | nucleus | 50.97 | 47.76 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 47.48 | 45.77 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 50.06 | 45.75 |
| KXG30181 | Sorghum | nucleus | 46.58 | 44.84 |
| CDY52039 | Canola | plastid | 38.97 | 43.96 |
| CDX81912 | Canola | nucleus | 14.19 | 43.82 |
| CDX84021 | Canola | plastid | 38.84 | 43.62 |
| Os02t0469300-02 | Rice | nucleus | 45.16 | 43.59 |
| CDX69668 | Canola | nucleus, plastid | 42.32 | 39.42 |
| CDX97228 | Canola | nucleus, plastid | 42.19 | 39.4 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 19.61 | 37.72 |
| CDY21683 | Canola | nucleus | 29.68 | 35.71 |
| Zm00001d053268_P001 | Maize | cytosol | 23.61 | 34.79 |
| CDY41018 | Canola | nucleus | 29.94 | 34.12 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 7.74 | 33.9 |
| CDX81913 | Canola | nucleus | 15.74 | 32.53 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 9.55 | 29.48 |
| CDX75568 | Canola | cytosol | 30.06 | 17.3 |
| CDX69218 | Canola | cytosol | 30.06 | 17.25 |
Protein Annotations
| EnsemblPlants:CDY45818 | EnsemblPlantsGene:GSBRNA2T00082756001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | PFAM:PF13589 | ProteinID:CDY45818 | ProteinID:CDY45818.1 |
| SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0004EF3CBD | UniProt:A0A078I9J9 | MapMan:12.5.1.2 | : |
Description
BnaC03g16410DBnaC03g16410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9J9]
Coordinates
chrLK032637:-:146053..150280
Molecular Weight (calculated)
86871.9 Da
IEP (calculated)
6.595
GRAVY (calculated)
-0.688
Length
775 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDAIRVKQ EILPTPTSVN GIKPSVIDLC SSDEEDNDGI GASRAVGEKR ARSGDIDTPA KRVAVEEGIG QSSSIVALQA TPCNVVRPSS SSSSAPSCKQ
101: FWKAGDYEGT SGGHWEVSAG GFDHVRVHPK FLHSNATSHK WALGAFAELL DNALDEVHSG ATYVNVNMLN NKKDGSRMLL IEDNGGGMNP EKMRHCMSLG
201: YSAKSKLANT IGQYGNGFKT STMRLGADVI VFSRCPGKDG DSFTQTIGLL SYTFLKSTGK EDIVVPMLDY ERDGSEWSPI VRSSVSDWNK NVDTIVQWSP
301: FSTEDELLCQ FNLMKEHGTR IIIYNLWEDD QGLLELDFDT DPHDIQLRGV NRDEKSISMA AQYPNSRHFL TYRHSLRSYV SILYLRVPPE FRIILRGRDV
401: EHHNIVNDMM HTNQITYRPK EGPGGQSNFS NLYSKDLFLQ ILFEELAQFL NMMSAVVTIG FVKDAKHHVD VQGFNVYHKN RLIKPFWRIW NAAGSQGRGI
501: IGVLEADFVE PAHDKQGFER TTVLSRLETR LLVMQKNYWR LNCHRIGYVS AHGKKSAKDS EDRESSPEYA VSTRKRAAAA SLSFKTPTAA RTVVNRGGKG
601: KGSVRDSNGV GSSEKSGKHG NTSSKFNGRA KARVAPPAVE DINSDEDSDH DPPGEENVTE PPEKSFEPPA KPRSADSRTL SQLEQENETL KERLNKKEAV
701: YLLLQEELRR EKELRKKLEA EVQRTKDELE DVKKEQESLI DIFSEDRDRR DKEEEDLRNK LEEASNTIQA LRGRR
101: FWKAGDYEGT SGGHWEVSAG GFDHVRVHPK FLHSNATSHK WALGAFAELL DNALDEVHSG ATYVNVNMLN NKKDGSRMLL IEDNGGGMNP EKMRHCMSLG
201: YSAKSKLANT IGQYGNGFKT STMRLGADVI VFSRCPGKDG DSFTQTIGLL SYTFLKSTGK EDIVVPMLDY ERDGSEWSPI VRSSVSDWNK NVDTIVQWSP
301: FSTEDELLCQ FNLMKEHGTR IIIYNLWEDD QGLLELDFDT DPHDIQLRGV NRDEKSISMA AQYPNSRHFL TYRHSLRSYV SILYLRVPPE FRIILRGRDV
401: EHHNIVNDMM HTNQITYRPK EGPGGQSNFS NLYSKDLFLQ ILFEELAQFL NMMSAVVTIG FVKDAKHHVD VQGFNVYHKN RLIKPFWRIW NAAGSQGRGI
501: IGVLEADFVE PAHDKQGFER TTVLSRLETR LLVMQKNYWR LNCHRIGYVS AHGKKSAKDS EDRESSPEYA VSTRKRAAAA SLSFKTPTAA RTVVNRGGKG
601: KGSVRDSNGV GSSEKSGKHG NTSSKFNGRA KARVAPPAVE DINSDEDSDH DPPGEENVTE PPEKSFEPPA KPRSADSRTL SQLEQENETL KERLNKKEAV
701: YLLLQEELRR EKELRKKLEA EVQRTKDELE DVKKEQESLI DIFSEDRDRR DKEEEDLRNK LEEASNTIQA LRGRR
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL YNLKIWLLVL HVSQLSAVVT IGFVKDAKHH VDVQGFNVYH
501: KNRLIKPFWR IWNAAGSDGR GVIGVLEANF VEPAHDKQGF ERTTVLSRLE ARLLHMQKDY WRSKCHKIGY AKRQGRKSAK DTEKDTEDRE SSPEFDPKGS
601: ASSRKRTVPS SFKTPTAAPR FNTPTAASEK FNPRSNVNGG GKGSVKVSKD IGYKSSEKGG KLGNSFSKSN KRAKPQGARA VEVTNSDDDY DCDSSPERNV
701: TELPGKSSEL PKPQSGPRTL SQLEQENNEL RERLDKKEEV FLLLQKDLRR ERELRKTLEA EVETLKNKLK EMDKEQASLI DVFAEDRDRR DKEEENLRIK
801: LEEASNTIQK LIDGKARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL YNLKIWLLVL HVSQLSAVVT IGFVKDAKHH VDVQGFNVYH
501: KNRLIKPFWR IWNAAGSDGR GVIGVLEANF VEPAHDKQGF ERTTVLSRLE ARLLHMQKDY WRSKCHKIGY AKRQGRKSAK DTEKDTEDRE SSPEFDPKGS
601: ASSRKRTVPS SFKTPTAAPR FNTPTAASEK FNPRSNVNGG GKGSVKVSKD IGYKSSEKGG KLGNSFSKSN KRAKPQGARA VEVTNSDDDY DCDSSPERNV
701: TELPGKSSEL PKPQSGPRTL SQLEQENNEL RERLDKKEEV FLLLQKDLRR ERELRKTLEA EVETLKNKLK EMDKEQASLI DVFAEDRDRR DKEEENLRIK
801: LEEASNTIQK LIDGKARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.