Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84876 | Canola | nucleus | 68.62 | 74.14 |
| Bra022762.1-P | Field mustard | nucleus | 68.62 | 74.04 |
| CDY45818 | Canola | nucleus | 69.6 | 73.55 |
| AT4G24970.1 | Thale cress | nucleus | 55.8 | 64.64 |
| CDX71661 | Canola | cytosol | 11.84 | 58.79 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 54.7 | 53.98 |
| KRH41106 | Soybean | nucleus | 52.75 | 52.68 |
| Solyc03g097520.2.1 | Tomato | nucleus | 53.36 | 52.4 |
| KRH59787 | Soybean | nucleus | 52.63 | 52.18 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 48.35 | 50.19 |
| EES10563 | Sorghum | nucleus | 47.99 | 49.87 |
| Zm00001d004118_P003 | Maize | nucleus | 47.86 | 49.12 |
| GSMUA_Achr11P... | Banana | nucleus | 48.96 | 48.49 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 47.62 | 48.33 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 45.91 | 46.77 |
| Zm00001d053269_P001 | Maize | cytosol | 14.9 | 46.74 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 47.74 | 46.11 |
| KXG30181 | Sorghum | nucleus | 43.59 | 44.35 |
| AT5G13130.1 | Thale cress | nucleus | 37.97 | 43.93 |
| Os02t0469300-02 | Rice | nucleus | 42.12 | 42.96 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 19.29 | 39.21 |
| AT4G36280.1 | Thale cress | cytosol | 29.79 | 38.98 |
| AT4G36290.1 | Thale cress | cytosol | 29.18 | 37.64 |
| AT1G19100.1 | Thale cress | nucleus | 29.18 | 36.05 |
| AT4G36270.1 | Thale cress | cytosol | 21.12 | 35.6 |
| Zm00001d053268_P001 | Maize | cytosol | 22.71 | 35.36 |
Protein Annotations
| MapMan:12.5.1.2 | Gene3D:3.30.565.10 | EntrezGene:835150 | ArrayExpress:AT5G50780 | EnsemblPlantsGene:AT5G50780 | RefSeq:AT5G50780 |
| TAIR:AT5G50780 | RefSeq:AT5G50780-TAIR-G | EnsemblPlants:AT5G50780.1 | TAIR:AT5G50780.1 | Unigene:At.29713 | ncoils:Coil |
| InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 | PFAM:PF13589 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | SUPFAM:SSF55874 | UniParc:UPI0001A7B176 | SEG:seg |
Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
Coordinates
chr5:+:20650269..20655212
Molecular Weight (calculated)
91930.3 Da
IEP (calculated)
7.464
GRAVY (calculated)
-0.708
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL YNLKIWLLVL HVSQLSAVVT IGFVKDAKHH VDVQGFNVYH
501: KNRLIKPFWR IWNAAGSDGR GVIGVLEANF VEPAHDKQGF ERTTVLSRLE ARLLHMQKDY WRSKCHKIGY AKRQGRKSAK DTEKDTEDRE SSPEFDPKGS
601: ASSRKRTVPS SFKTPTAAPR FNTPTAASEK FNPRSNVNGG GKGSVKVSKD IGYKSSEKGG KLGNSFSKSN KRAKPQGARA VEVTNSDDDY DCDSSPERNV
701: TELPGKSSEL PKPQSGPRTL SQLEQENNEL RERLDKKEEV FLLLQKDLRR ERELRKTLEA EVETLKNKLK EMDKEQASLI DVFAEDRDRR DKEEENLRIK
801: LEEASNTIQK LIDGKARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL YNLKIWLLVL HVSQLSAVVT IGFVKDAKHH VDVQGFNVYH
501: KNRLIKPFWR IWNAAGSDGR GVIGVLEANF VEPAHDKQGF ERTTVLSRLE ARLLHMQKDY WRSKCHKIGY AKRQGRKSAK DTEKDTEDRE SSPEFDPKGS
601: ASSRKRTVPS SFKTPTAAPR FNTPTAASEK FNPRSNVNGG GKGSVKVSKD IGYKSSEKGG KLGNSFSKSN KRAKPQGARA VEVTNSDDDY DCDSSPERNV
701: TELPGKSSEL PKPQSGPRTL SQLEQENNEL RERLDKKEEV FLLLQKDLRR ERELRKTLEA EVETLKNKLK EMDKEQASLI DVFAEDRDRR DKEEENLRIK
801: LEEASNTIQK LIDGKARGR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.