Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022762.1-P | Field mustard | nucleus | 99.34 | 99.21 |
| CDY45818 | Canola | nucleus | 96.17 | 94.06 |
| AT5G50780.1 | Thale cress | nucleus | 74.14 | 68.62 |
| CDY03400 | Canola | nucleus | 59.89 | 67.46 |
| CDY34330 | Canola | nucleus | 59.89 | 67.16 |
| CDX92664 | Canola | nucleus | 59.63 | 65.32 |
| CDY11045 | Canola | nucleus | 59.76 | 64.99 |
| CDX71661 | Canola | cytosol | 12.8 | 58.79 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 59.63 | 54.46 |
| KRH41106 | Soybean | nucleus | 56.6 | 52.32 |
| Solyc03g097520.2.1 | Tomato | nucleus | 56.99 | 51.8 |
| KRH59787 | Soybean | nucleus | 56.33 | 51.69 |
| EES10563 | Sorghum | nucleus | 51.72 | 49.75 |
| Zm00001d004118_P003 | Maize | nucleus | 51.98 | 49.37 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 51.32 | 49.3 |
| Zm00001d053269_P001 | Maize | cytosol | 16.89 | 49.04 |
| GSMUA_Achr11P... | Banana | nucleus | 52.51 | 48.13 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 50.66 | 47.58 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 48.42 | 45.65 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 50.79 | 45.4 |
| KXG30181 | Sorghum | nucleus | 47.49 | 44.72 |
| CDY52039 | Canola | plastid | 40.11 | 44.25 |
| CDX81912 | Canola | nucleus | 14.64 | 44.22 |
| Os02t0469300-02 | Rice | nucleus | 46.57 | 43.96 |
| CDX84021 | Canola | plastid | 39.97 | 43.91 |
| CDX69668 | Canola | nucleus, plastid | 43.54 | 39.66 |
| CDX97228 | Canola | nucleus, plastid | 43.4 | 39.64 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 19.92 | 37.47 |
| CDY21683 | Canola | nucleus | 30.47 | 35.87 |
| Zm00001d053268_P001 | Maize | cytosol | 24.27 | 34.98 |
| CDY41018 | Canola | nucleus | 30.74 | 34.26 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 7.92 | 33.9 |
| CDX81913 | Canola | nucleus | 16.09 | 32.53 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 9.76 | 29.48 |
| CDX75568 | Canola | cytosol | 30.74 | 17.3 |
| CDX69218 | Canola | cytosol | 30.74 | 17.25 |
Protein Annotations
| EnsemblPlants:CDX84876 | EnsemblPlantsGene:GSBRNA2T00142199001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | PFAM:PF13589 | ProteinID:CDX84876 | ProteinID:CDX84876.1 |
| SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0004EDEE33 | MapMan:12.5.1.2 | : | : |
Description
BnaA03g13540D
Coordinates
chrLK031838:+:1711021..1715393
Molecular Weight (calculated)
85085.7 Da
IEP (calculated)
6.801
GRAVY (calculated)
-0.748
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDAIRVKL ENLPTPTSVN GIKPSVIDLC SSDEEDNDGI DASRTVGEKR ARRDCDINTP AKRVAVEEGL GQSSSIVALQ ATPCNVVRPS SSAASCKQFW
101: KAGDYEGTSG GHWEVSAGGF DHVRVHPKFL HSNATSHKWA LGAFAELLDN ALDEVHSGAT YVNVNMLTNK KDGSRMLLIE DNGGGMNPEK MRHCMSLGYS
201: AKSKLANTIG QYGNGFKTST MRLGADVIVF SRCPGKDGDS FTQTIGLLSY TFLKSTGKED IVVPMLDYER EGSEWSPIVR SSASDWNKNV DTIVQWSPFS
301: TEDELLCQFN LMKEHGTRII IYNLWEDDQG LLELDFDTDP HDIQLRGVNR DEKSISMAAQ YPNSRHFLTY RHSLRSYVSI LYLRVPPEFR IILRGRDVEH
401: HNIVNDMMHT NQITYRPKEG PGGQSNFSNM SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA GSQGRGIIGV LEADFVEPAH DKQGFERTTV
501: LSRLETRLLV MQKNYWRLNC HRIGYVSAHG KKSAKDSEDR ESSPEYAVPT RKRAAAAASL SFKTPTGART VVNRGGKGKG SVRDSNGVGS SEKSGKHGNT
601: SSKFNGRAKA RGAPPALEDI NSDEDSDYDP PGEENVTELP EKSFEPPTKP RSTDSRTLSQ LEQENETLKE RLNKKEAVYL LLQEELRREK ELRKKLEAEV
701: QRTKDELEDV KKEQESLIDI FSEDRDRRDK EEEDLRNKLE EASKRIQALL DEKSRGRR
101: KAGDYEGTSG GHWEVSAGGF DHVRVHPKFL HSNATSHKWA LGAFAELLDN ALDEVHSGAT YVNVNMLTNK KDGSRMLLIE DNGGGMNPEK MRHCMSLGYS
201: AKSKLANTIG QYGNGFKTST MRLGADVIVF SRCPGKDGDS FTQTIGLLSY TFLKSTGKED IVVPMLDYER EGSEWSPIVR SSASDWNKNV DTIVQWSPFS
301: TEDELLCQFN LMKEHGTRII IYNLWEDDQG LLELDFDTDP HDIQLRGVNR DEKSISMAAQ YPNSRHFLTY RHSLRSYVSI LYLRVPPEFR IILRGRDVEH
401: HNIVNDMMHT NQITYRPKEG PGGQSNFSNM SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA GSQGRGIIGV LEADFVEPAH DKQGFERTTV
501: LSRLETRLLV MQKNYWRLNC HRIGYVSAHG KKSAKDSEDR ESSPEYAVPT RKRAAAAASL SFKTPTGART VVNRGGKGKG SVRDSNGVGS SEKSGKHGNT
601: SSKFNGRAKA RGAPPALEDI NSDEDSDYDP PGEENVTELP EKSFEPPTKP RSTDSRTLSQ LEQENETLKE RLNKKEAVYL LLQEELRREK ELRKKLEAEV
701: QRTKDELEDV KKEQESLIDI FSEDRDRRDK EEEDLRNKLE EASKRIQALL DEKSRGRR
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.