Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G291200.1 | Wheat | nucleus | 94.42 | 96.58 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 98.51 | 93.75 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 81.54 | 81.84 |
| EES10563 | Sorghum | nucleus | 71.62 | 73.35 |
| Zm00001d004118_P003 | Maize | nucleus | 71.62 | 72.43 |
| GSMUA_Achr11P... | Banana | nucleus | 56.63 | 55.26 |
| CDX71661 | Canola | cytosol | 11.28 | 55.15 |
| CDY34330 | Canola | nucleus | 46.1 | 55.03 |
| CDY03400 | Canola | nucleus | 45.85 | 54.98 |
| Bra019199.1-P | Field mustard | cytosol | 46.22 | 53.59 |
| Bra013851.1-P | Field mustard | nucleus | 46.1 | 53.53 |
| CDY11045 | Canola | nucleus | 46.1 | 53.37 |
| CDX92664 | Canola | nucleus | 45.72 | 53.32 |
| AT4G24970.1 | Thale cress | nucleus | 45.6 | 52.05 |
| CDX84876 | Canola | nucleus | 47.58 | 50.66 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 52.04 | 50.6 |
| Bra022762.1-P | Field mustard | nucleus | 47.46 | 50.46 |
| KRH41106 | Soybean | nucleus | 51.05 | 50.24 |
| Solyc03g097520.2.1 | Tomato | nucleus | 51.67 | 50.0 |
| CDY45818 | Canola | nucleus | 47.96 | 49.94 |
| KRH59787 | Soybean | nucleus | 50.81 | 49.64 |
| AT5G50780.1 | Thale cress | nucleus | 48.33 | 47.62 |
| PGSC0003DMT400088594 | Potato | nucleus | 43.62 | 47.19 |
| Solyc01g009920.1.1 | Tomato | nucleus | 42.87 | 44.59 |
| CDY52039 | Canola | plastid | 37.79 | 44.4 |
| CDX84021 | Canola | plastid | 37.67 | 44.06 |
| AT5G13130.1 | Thale cress | nucleus | 38.54 | 43.93 |
| Solyc10g081760.1.1 | Tomato | nucleus | 43.62 | 41.61 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 27.88 | 41.06 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 30.61 | 40.1 |
| CDX69668 | Canola | nucleus, plastid | 39.65 | 38.46 |
| CDX97228 | Canola | nucleus, plastid | 39.53 | 38.43 |
| TraesCS3A01G192600.2 | Wheat | cytosol | 30.73 | 38.21 |
| Bra016690.1-P | Field mustard | plastid | 38.04 | 37.48 |
| PGSC0003DMT400072308 | Potato | nucleus | 43.74 | 37.47 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 27.51 | 35.69 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 17.6 | 35.24 |
| TraesCS3A01G329400.1 | Wheat | plastid | 29.62 | 33.33 |
| TraesCS7A01G235300.2 | Wheat | nucleus | 29.12 | 23.43 |
| TraesCS7A01G399000.1 | Wheat | cytosol | 14.99 | 15.94 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G273000.2 | EnsemblPlantsGene:TraesCS2A01G273000 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF21 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| TIGR:cd00075 | MapMan:12.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:447138282..447156804
Molecular Weight (calculated)
89549.2 Da
IEP (calculated)
8.913
GRAVY (calculated)
-0.705
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPRVVKTEA ADERLTLPAT GAGGGGPRAP VQFIELSSSD SDSDGGVSGS AKRSHSAAGD SAAGKRARVS AGPVVGVDVP PGFLDPLPAP PQPSRGTTKQ
101: FWKAGDYDGN PAGGAEPPPS ASGLEHVRVH PKFLHSNATS HKWALGALAE LLDNSLDEVR NGATFVNIDM LENSKDKTRM LLVEDNGGGM DPDKMRQCMS
201: LGYSAKSQVA NTIGQYGNGF KTSTMRLGAD VLVFSRSRGK EGKRPTQSIG MLSYTFLRST GKEDIVVPMI DYEKNGLNWT RKLRSTFADW NTSLQTIITW
301: SPYGTEAELL EQFSSIKEQG TRVIIYNLWE DDQGDLELDF DADVNDIQLR GGNRDEKNIE MAKRFPNSKH FLTYRHSLRS YASILYLRLS DAFQIFLRGK
401: EIEHHNIVTD MMLKKEVTYR PVATNGLPKD SNMVADVTIG FVKDAKFHID VQGFNVYHRN RLIKPFWRVW TAAGSGGRGV IGVLEANFIE PAHDKQDFER
501: TTLLARLEAR LIQMQKDYWS GNAHRIGYVG ARSFRSPETG RENSPEGSPG AQPSPGHSGK DYPKQRSAGK SYSASSKKSG KTSTPFSCQQ AEKSARTKRS
601: AGSILHGLPD TSDDSDSEFV NTPSLSSKSH ILNAHRKYFQ NENTSLATPA SNGTTEKERS ITKSQLAEPN ARSNVDGHSI DDHEPVIKQL RDENASLKER
701: LLIVEEATSQ ELVMERDKVK SLTERLEDLQ RQLDTANKEQ EALIDIFSEE RSRRDEEEEN LRQKLKHAWS LIGRKHRTPY KSCCWRNQTL AGKVKRCEKL
801: TMLLPPH
101: FWKAGDYDGN PAGGAEPPPS ASGLEHVRVH PKFLHSNATS HKWALGALAE LLDNSLDEVR NGATFVNIDM LENSKDKTRM LLVEDNGGGM DPDKMRQCMS
201: LGYSAKSQVA NTIGQYGNGF KTSTMRLGAD VLVFSRSRGK EGKRPTQSIG MLSYTFLRST GKEDIVVPMI DYEKNGLNWT RKLRSTFADW NTSLQTIITW
301: SPYGTEAELL EQFSSIKEQG TRVIIYNLWE DDQGDLELDF DADVNDIQLR GGNRDEKNIE MAKRFPNSKH FLTYRHSLRS YASILYLRLS DAFQIFLRGK
401: EIEHHNIVTD MMLKKEVTYR PVATNGLPKD SNMVADVTIG FVKDAKFHID VQGFNVYHRN RLIKPFWRVW TAAGSGGRGV IGVLEANFIE PAHDKQDFER
501: TTLLARLEAR LIQMQKDYWS GNAHRIGYVG ARSFRSPETG RENSPEGSPG AQPSPGHSGK DYPKQRSAGK SYSASSKKSG KTSTPFSCQQ AEKSARTKRS
601: AGSILHGLPD TSDDSDSEFV NTPSLSSKSH ILNAHRKYFQ NENTSLATPA SNGTTEKERS ITKSQLAEPN ARSNVDGHSI DDHEPVIKQL RDENASLKER
701: LLIVEEATSQ ELVMERDKVK SLTERLEDLQ RQLDTANKEQ EALIDIFSEE RSRRDEEEEN LRQKLKHAWS LIGRKHRTPY KSCCWRNQTL AGKVKRCEKL
801: TMLLPPH
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.