Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G322900.1 | Wheat | plastid | 98.47 | 98.19 |
| TraesCS3B01G359600.1 | Wheat | cytosol | 92.75 | 94.46 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 91.91 | 82.58 |
| Os11t0454800-01 | Rice | cytosol | 41.7 | 66.0 |
| EER87847 | Sorghum | plastid | 63.04 | 61.41 |
| KXG33558 | Sorghum | cytosol | 61.79 | 60.11 |
| Zm00001d043191_P005 | Maize | cytosol | 61.23 | 59.49 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 58.86 | 56.27 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 37.94 | 52.01 |
| TraesCS3A01G192600.2 | Wheat | cytosol | 41.98 | 46.38 |
| CDX81912 | Canola | nucleus | 16.18 | 46.22 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 39.05 | 44.44 |
| Solyc06g071580.2.1 | Tomato | cytosol | 36.68 | 43.76 |
| KRH63565 | Soybean | cytosol | 39.47 | 41.13 |
| AT1G19100.1 | Thale cress | nucleus | 37.8 | 40.87 |
| Bra031063.1-P | Field mustard | nucleus | 37.52 | 40.39 |
| CDY21683 | Canola | nucleus | 36.26 | 40.37 |
| KRH03266 | Soybean | mitochondrion | 37.8 | 40.15 |
| Solyc01g099300.2.1 | Tomato | nucleus | 39.75 | 39.97 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 30.27 | 39.6 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 39.05 | 39.49 |
| CDY41018 | Canola | nucleus | 37.24 | 39.26 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 33.19 | 38.64 |
| CDX81913 | Canola | nucleus | 19.53 | 37.33 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 33.33 | 29.62 |
| TraesCS7A01G235300.2 | Wheat | nucleus | 38.49 | 27.52 |
| TraesCS7A01G399000.1 | Wheat | cytosol | 18.13 | 17.13 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G329400.1 | EnsemblPlantsGene:TraesCS3A01G329400 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF45 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| TIGR:cd00075 | MapMan:12.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:574461613..574465794
Molecular Weight (calculated)
78677.5 Da
IEP (calculated)
7.456
GRAVY (calculated)
-0.407
Length
717 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTGNRHTGT TTDPMDTRRD VKPFLAPVTS HNQRGVPGFG VCQAAPTPLG RGARVSAAPQ QAACVVNRAA SLEPEGGCSR DAEAAGAPAR RPAPPPPPLL
101: AARVSRKFWT AGDYDAAGGS PAQPPRNVGS RMCVHPKFLH SNATSHKWPF GAVAELLDNA VDEIKTGATR IVVDKIVNKR NGSPALLVQD DGGGMDPDSM
201: RRCMSFGFSD KQSGSSIGQY GNGFKTSTMR LGADAIVFSR CMKGSGPTQS VGLLSYTFLA ETGQKDVVVP MVDYKYDLLT GDAIQYERHG ADQFCSNLSV
301: LLKWSPFATE EDLMGNFSDI GPHGTKIIVF NLWSNDDGVL ELDFDTKEED IMISGAPNPA ETTNAVKRTN ENHLSNQLRY SLRVYASVLY LQLPGYFKII
401: LRGQEVQRHS IATDLIYRQA VSYTPLEFLR KKEGEVVTSI GFLNGAPTIS VHGFNIYHRN RLILPFHRVL SSASSKGRGV AGVLEANFIK PTHDKQDFEK
501: SQLYQKLIIR LKDMTTEYWD LHSHLIGYQK KPRASVSPTP PGMLTASDTI AEPSERNAVG AGLSVAPWRG GTRDHPASAI PIAFAPPHLS VPAGTSGHAP
601: CSMLAAQMVP ATDSAETRKR RNEDDVQMDP CKRQAIQSLE VDNQICQHMT ERDLNEFEHL KFENQQLHEE CLELEVAEKE LLLKEQQLRL QIQQAEAQYK
701: SLLNEYISAT PVRTRMP
101: AARVSRKFWT AGDYDAAGGS PAQPPRNVGS RMCVHPKFLH SNATSHKWPF GAVAELLDNA VDEIKTGATR IVVDKIVNKR NGSPALLVQD DGGGMDPDSM
201: RRCMSFGFSD KQSGSSIGQY GNGFKTSTMR LGADAIVFSR CMKGSGPTQS VGLLSYTFLA ETGQKDVVVP MVDYKYDLLT GDAIQYERHG ADQFCSNLSV
301: LLKWSPFATE EDLMGNFSDI GPHGTKIIVF NLWSNDDGVL ELDFDTKEED IMISGAPNPA ETTNAVKRTN ENHLSNQLRY SLRVYASVLY LQLPGYFKII
401: LRGQEVQRHS IATDLIYRQA VSYTPLEFLR KKEGEVVTSI GFLNGAPTIS VHGFNIYHRN RLILPFHRVL SSASSKGRGV AGVLEANFIK PTHDKQDFEK
501: SQLYQKLIIR LKDMTTEYWD LHSHLIGYQK KPRASVSPTP PGMLTASDTI AEPSERNAVG AGLSVAPWRG GTRDHPASAI PIAFAPPHLS VPAGTSGHAP
601: CSMLAAQMVP ATDSAETRKR RNEDDVQMDP CKRQAIQSLE VDNQICQHMT ERDLNEFEHL KFENQQLHEE CLELEVAEKE LLLKEQQLRL QIQQAEAQYK
701: SLLNEYISAT PVRTRMP
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.