Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G235400.1 | Wheat | cytosol | 93.62 | 89.26 |
| TraesCS7B01G133500.2 | Wheat | cytosol | 92.82 | 84.95 |
| HORVU7Hr1G048310.12 | Barley | cytosol | 73.88 | 84.59 |
| CDX81912 | Canola | nucleus | 11.76 | 47.01 |
| Solyc06g071580.2.1 | Tomato | cytosol | 27.62 | 46.09 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 28.81 | 45.87 |
| TraesCS3A01G192600.2 | Wheat | cytosol | 27.82 | 42.99 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 29.91 | 42.31 |
| AT1G19100.1 | Thale cress | nucleus | 27.92 | 42.23 |
| OQU76414 | Sorghum | cytosol | 39.18 | 41.46 |
| KRH63565 | Soybean | cytosol | 28.32 | 41.28 |
| Solyc01g099300.2.1 | Tomato | nucleus | 29.21 | 41.09 |
| Zm00001d045978_P002 | Maize | cytosol | 39.28 | 40.33 |
| Bra031063.1-P | Field mustard | nucleus | 26.72 | 40.24 |
| CDY21683 | Canola | nucleus | 25.72 | 40.06 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 21.83 | 39.96 |
| KRH03266 | Soybean | mitochondrion | 26.72 | 39.7 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 24.03 | 39.12 |
| CDY41018 | Canola | nucleus | 26.32 | 38.82 |
| TraesCS3A01G329400.1 | Wheat | plastid | 27.52 | 38.49 |
| CDX81913 | Canola | nucleus | 13.56 | 36.27 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 23.43 | 29.12 |
| TraesCS7A01G399000.1 | Wheat | cytosol | 12.96 | 17.13 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G235300.2 | EnsemblPlantsGene:TraesCS7A01G235300 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| TIGR:cd00075 | MapMan:12.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:206954246..206975562
Molecular Weight (calculated)
110436.0 Da
IEP (calculated)
4.856
GRAVY (calculated)
-0.463
Length
1003 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALLDWIELS DDEEVTVKEK LPPEKVKEEF PPTNVKEEFP PTRVKEELDT HIHGTAQLEV EIVDLTIEEA DVEEDRNAHG KGDAAQGATT SHRQQFLAPH
0101: GQGEAAQTVV PRQEFLAAAN GVEEFLVIGD VAQEAMQSGN QDFAAAVDCA EEATHSENAD EAGPSLFTEQ GAAAGDCGEE AMQPGNQDFA AAVDCAEEAM
0201: QSENAAEAGP SSFTEQGVAA GDCSEEALQP GNQDFSAAVD YAEEAMQSEN AAEAGPLSST GQGVVAGDCS EEAMQSGKQD FVAAVDCAEE AMQSGNAVEG
0301: APSSFTEGVA AGDFAEEAMQ YNHEDKAAEC SSMTRQAASS SLSMTEQGAT TSSLRTAQQS HKRDALIDSP PIATVAPFPR QFWKAGEYKV ASRASINNGQ
0401: NCLRINPKFL HSNATSHKWV FGAIAELLDN AVDEVQNGAT YVKIDKMKYS PVGEYSLMIQ DDGGGMSPEY LRHCLSFGFS NKCTDSSIGQ YGNGFKTSTM
0501: RLGADAIIFS CRKANRLTRS VGLLSYTFLK GTGCDDILVP VVDYEFDPSS RNFKRIMDRG EKHFSSNLST LLRWSKFSTE DDLLNQFEDM GCHGTKIVVF
0601: NLWLNDVDEM ELDFTTDDED IMMSGAPKIP EERAKVKRLN HMHIANRFRY SLRVYASILY LRLPQHFKVI LCGRTVEPHH IIKDLIYREC IKYRPQVGTS
0701: VQVDVITSIG FLKGAPHLDI YGFNVYHRNR LILPFWAAGS ERGRGRGIAG VLEANFIRPT HDKQDFEKTE LFQRLETRLK DMTMEYWRHH AHLIGYQPVT
0801: KSLPPAYYTS IAATNDSSVA QATATTYARN SRAKASGVLN SRFNGGNSLN PLHVGALRDQ MDYGACSLAR RNMRTSLYMP STPQQTELCK RRNSGSMIEM
0901: RAQKRHNTNG DADHVGSVNV VEIGEERSSL LLCQNMMLKA ECSELEAAGQ TLRSKADRLM GELREWQRKR RSLTDELEFY NGLSAIQRRI PIASTSSMGV
1001: GWI
0101: GQGEAAQTVV PRQEFLAAAN GVEEFLVIGD VAQEAMQSGN QDFAAAVDCA EEATHSENAD EAGPSLFTEQ GAAAGDCGEE AMQPGNQDFA AAVDCAEEAM
0201: QSENAAEAGP SSFTEQGVAA GDCSEEALQP GNQDFSAAVD YAEEAMQSEN AAEAGPLSST GQGVVAGDCS EEAMQSGKQD FVAAVDCAEE AMQSGNAVEG
0301: APSSFTEGVA AGDFAEEAMQ YNHEDKAAEC SSMTRQAASS SLSMTEQGAT TSSLRTAQQS HKRDALIDSP PIATVAPFPR QFWKAGEYKV ASRASINNGQ
0401: NCLRINPKFL HSNATSHKWV FGAIAELLDN AVDEVQNGAT YVKIDKMKYS PVGEYSLMIQ DDGGGMSPEY LRHCLSFGFS NKCTDSSIGQ YGNGFKTSTM
0501: RLGADAIIFS CRKANRLTRS VGLLSYTFLK GTGCDDILVP VVDYEFDPSS RNFKRIMDRG EKHFSSNLST LLRWSKFSTE DDLLNQFEDM GCHGTKIVVF
0601: NLWLNDVDEM ELDFTTDDED IMMSGAPKIP EERAKVKRLN HMHIANRFRY SLRVYASILY LRLPQHFKVI LCGRTVEPHH IIKDLIYREC IKYRPQVGTS
0701: VQVDVITSIG FLKGAPHLDI YGFNVYHRNR LILPFWAAGS ERGRGRGIAG VLEANFIRPT HDKQDFEKTE LFQRLETRLK DMTMEYWRHH AHLIGYQPVT
0801: KSLPPAYYTS IAATNDSSVA QATATTYARN SRAKASGVLN SRFNGGNSLN PLHVGALRDQ MDYGACSLAR RNMRTSLYMP STPQQTELCK RRNSGSMIEM
0901: RAQKRHNTNG DADHVGSVNV VEIGEERSSL LLCQNMMLKA ECSELEAAGQ TLRSKADRLM GELREWQRKR RSLTDELEFY NGLSAIQRRI PIASTSSMGV
1001: GWI
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.