Factsheet for VIT_14s0066g00870.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
vacuole 1
cytosol 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g08750.t01	Wine grape	nucleus	60.0	53.31
GSMUA_Achr9P25210_001	Banana	cytosol	43.33	52.2
GSMUA_Achr4P13250_001	Banana	cytosol	44.6	45.4
Os01t0549200-02	Rice	cytosol, peroxisome, plastid	25.56	44.35
Os11t0454800-01	Rice	cytosol	31.59	43.93
TraesCS3D01G202400.1	Wheat	cytosol	45.08	43.76
TraesCS3A01G192600.2	Wheat	cytosol	45.08	43.76
TraesCS3B01G231900.1	Wheat	cytosol	45.08	43.76
HORVU3Hr1G046280.3	Barley	cytosol	44.6	43.3
VIT_04s0023g02740.t01	Wine grape	cytosol	43.33	42.59
EES00907	Sorghum	cytosol	45.24	42.16
Zm00001d044506_P006	Maize	cytosol	45.56	40.94
TraesCS3B01G359600.1	Wheat	cytosol	44.29	39.63
TraesCS3A01G329400.1	Wheat	plastid	44.44	39.05
TraesCS3D01G322900.1	Wheat	plastid	44.44	38.94
KXG33558	Sorghum	cytosol	44.76	38.26
EER87847	Sorghum	plastid	44.29	37.91
Zm00001d043191_P005	Maize	cytosol	44.29	37.8
Zm00001d012575_P001	Maize	mitochondrion, nucleus	43.97	36.93
HORVU3Hr1G078330.4	Barley	endoplasmic reticulum, plasma membrane	44.6	35.21
HORVU7Hr1G048310.12	Barley	cytosol	45.08	32.42
VIT_17s0000g00910.t01	Wine grape	nucleus	42.54	32.29
OQU76414	Sorghum	cytosol	43.49	28.9
TraesCS7A01G235300.2	Wheat	nucleus	45.87	28.81
Zm00001d045978_P002	Maize	cytosol	42.7	27.53
TraesCS7D01G235400.1	Wheat	cytosol	45.4	27.19
TraesCS7B01G133500.2	Wheat	cytosol	44.6	25.64
VIT_13s0147g00080.t01	Wine grape	cytosol	14.44	22.58
VIT_04s0044g01710.t01	Wine grape	plastid	17.78	18.95

Protein Annotations

ArrayExpress:VIT_14s0066g00870	EMBL:FN596252	EnsemblPlants:VIT_14s0066g00870.t01	EnsemblPlantsGene:VIT_14s0066g00870	Gene3D:3.30.565.10	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:IPR036890	ncoils:Coil	PANTHER:PTHR23336	PANTHER:PTHR23336:SF44	PFAM:PF13589
ProteinID:CCB58493	ProteinID:CCB58493.1	SEG:seg	SUPFAM:SSF55874	unigene:Vvi.8508	UniParc:UPI00021093DD
UniProt:F6HUX5	MapMan:12.5.1.2	:	:	:	:

Description

No Description!

Coordinates

chr14:-:27329416..27346395

Molecular Weight (calculated)

71401.7 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.485

Length

630 amino acids

Sequence
(BLAST)

001: MSDQDSTSMD ESSLFSATVV CPAPVCRQFW KAGNYDIGHG SKATNVKNHL CVHPMFLHSN ATSHKWAFGA IAELLDNAFD EIQNGATFVV IDKIPNPRDG
101: NPALLIQDDG GGMDPEAIRH CMSFGFSAKK SKTSIGQYGN GFKTSTMRLG ADVIVFSRHL KERSPTQSIG LLSYTFLRQT GCNKIVVPVV DYEFNASTGK
201: YGPILPHGKK HFSLNLSMLL QWSPYSTEDE LLLQFDDIGQ HGTKIVIYNL WLNDEGHMEL DFDSDVEDIC INRGPKLFQK GKHVNPIYDQ HMANLYHYSL
301: RIYSSILYLR IPQCFRIILR GRVVEHHNIA NDLKFWEIIL YRPHIGGNVE VPVLTTIGFL KDAPHVNIHG FNVYHRNRLI LPFWRVVKNT TNSNARGVVG
401: VLEANFIEPT HNKQDFEKTS LFQRLEDRLK QMTMEYWDSH CELIGYQQVK KTRAPVPSQE SLYSRTHGCS EPVLMNHSCH VVDSSKDASS AIGSFQFAGT
501: TPPHVSARNP GKPVDSYQIS SQQGLHTKWK QHKPPVELEH AKRHKGSGPD STDILCNREE KAVSESQDQE TLSIMQENEK LQSQLLEYEK TEQELNLKMQ
601: QLKRQLEDVR CEYAELLAES ESLNSIEENG

Best Arabidopsis Sequence Match ( AT1G19100.1 )
(BLAST)

001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT

Arabidopsis Description

MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.