Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G329400.1 | Wheat | plastid | 82.58 | 91.91 |
| TraesCS3D01G322900.1 | Wheat | plastid | 82.71 | 91.79 |
| TraesCS3B01G359600.1 | Wheat | cytosol | 80.2 | 90.91 |
| Os11t0454800-01 | Rice | cytosol | 38.1 | 67.11 |
| EER87847 | Sorghum | plastid | 56.77 | 61.55 |
| KXG33558 | Sorghum | cytosol | 56.14 | 60.79 |
| Zm00001d043191_P005 | Maize | cytosol | 55.01 | 59.49 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 53.13 | 56.53 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 34.21 | 52.2 |
| HORVU3Hr1G046280.3 | Barley | cytosol | 37.84 | 46.53 |
| CDX81912 | Canola | nucleus | 14.41 | 45.82 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 35.21 | 44.6 |
| Solyc06g071580.2.1 | Tomato | cytosol | 33.08 | 43.93 |
| AT1G19100.1 | Thale cress | nucleus | 34.09 | 41.03 |
| Bra031063.1-P | Field mustard | nucleus | 34.21 | 40.99 |
| CDY21683 | Canola | nucleus | 32.83 | 40.68 |
| KRH03266 | Soybean | mitochondrion | 34.09 | 40.3 |
| KRH63565 | Soybean | cytosol | 34.71 | 40.26 |
| Solyc01g099300.2.1 | Tomato | nucleus | 35.71 | 39.97 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 35.34 | 39.77 |
| CDY41018 | Canola | nucleus | 33.71 | 39.56 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 29.82 | 39.27 |
| CDX81913 | Canola | nucleus | 17.92 | 38.13 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 29.32 | 37.26 |
| HORVU7Hr1G048310.12 | Barley | cytosol | 34.59 | 31.51 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 29.45 | 29.23 |
| HORVU1Hr1G080470.5 | Barley | cytosol | 15.79 | 16.34 |
| HORVU7Hr1G093640.3 | Barley | cytosol | 6.52 | 14.9 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G078330.4 | EnsemblPlantsGene:HORVU3Hr1G078330 | Gene3D:3.30.565.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF45 |
| PFAM:PF13589 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF55874 | TMHMM:TMhelix | UniParc:UPI000B467448 |
| UniProt:A0A287LTH0 | MapMan:12.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:577713926..577718729
Molecular Weight (calculated)
87900.8 Da
IEP (calculated)
8.206
GRAVY (calculated)
-0.360
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENYFWLYL FLCSCCVVFL RLINHQGRDL STARPYRATD PSPSVMSVMC AGNRHTGTGT GTGAMDTRRD VKPFLAPVTS QRERGVPGFG ACQAAPTPLG
101: RGARVSAAPQ QAACVVNRAA SLEPEGGGCS RDIEAAGAPA RRPAPPPPLP GARVSRKFWS AGDYDAAGGS PAQPPRNVGS RMCVHPKFLH SNATSHKWPF
201: GAVAELLDNA VDEIKTGATR IVVDKIINKR NGSPALLVQD DGGGMDPDSM RRCMSFGFSE KQSGSSIGQY GNGFKTSTMR LGADAIVFSR CMKSSGPTQS
301: VGLLSYTFLA ETGQKDVVVP MVDYKYDLLT GEARQYERHG ADQFRSNLSV LSKWSPFATE EELMGNFSDI GPHGTKIIVF NLWSNDDGVL ELDFDTKEED
401: IMISGAPNPA ETTNAVKRTN ESHLSNQLRY SLRVYASVLY LQLPGYFKII LRGQEIQRHS IATDLIYRQA VSYTPQEFLR KKEGEVVTSI GFLNGAPTIS
501: VHGFNIYHRN RLILPFHRVL SSASSKGRGV AGVLEANFIK PTHDKQDFEK SQLYQKLIIR LKEMTTEYWD LHCHLIGYQM KPRPSVSPTP PRMLTESDTV
601: AEPSQRNAAA AILSVAPWSG GTRDNPASVI PIAFAPPHLS VPAGTSGNAT CSMPGAQMVS ATDSAETRKR RNEDAVQMDP CKRQATQSLE VNNQVCQHMT
701: ERDLKEFKFL KQENQQLQEE CLELEVAEKE HLLKVLPWSS VPQHILLKPC FADGSCELIM FFSVQAQQLR LEIEQAEAQY KSLLNEYISA TPVRTRMR
101: RGARVSAAPQ QAACVVNRAA SLEPEGGGCS RDIEAAGAPA RRPAPPPPLP GARVSRKFWS AGDYDAAGGS PAQPPRNVGS RMCVHPKFLH SNATSHKWPF
201: GAVAELLDNA VDEIKTGATR IVVDKIINKR NGSPALLVQD DGGGMDPDSM RRCMSFGFSE KQSGSSIGQY GNGFKTSTMR LGADAIVFSR CMKSSGPTQS
301: VGLLSYTFLA ETGQKDVVVP MVDYKYDLLT GEARQYERHG ADQFRSNLSV LSKWSPFATE EELMGNFSDI GPHGTKIIVF NLWSNDDGVL ELDFDTKEED
401: IMISGAPNPA ETTNAVKRTN ESHLSNQLRY SLRVYASVLY LQLPGYFKII LRGQEIQRHS IATDLIYRQA VSYTPQEFLR KKEGEVVTSI GFLNGAPTIS
501: VHGFNIYHRN RLILPFHRVL SSASSKGRGV AGVLEANFIK PTHDKQDFEK SQLYQKLIIR LKEMTTEYWD LHCHLIGYQM KPRPSVSPTP PRMLTESDTV
601: AEPSQRNAAA AILSVAPWSG GTRDNPASVI PIAFAPPHLS VPAGTSGNAT CSMPGAQMVS ATDSAETRKR RNEDAVQMDP CKRQATQSLE VNNQVCQHMT
701: ERDLKEFKFL KQENQQLQEE CLELEVAEKE HLLKVLPWSS VPQHILLKPC FADGSCELIM FFSVQAQQLR LEIEQAEAQY KSLLNEYISA TPVRTRMR
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.