Factsheet for AT1G19100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81912	Canola	nucleus	32.88	86.85
Bra031063.1-P	Field mustard	nucleus	83.41	83.03
CDY21683	Canola	nucleus	80.09	82.45
CDY41018	Canola	nucleus	82.05	80.0
CDX81913	Canola	nucleus	45.25	80.0
VIT_17s0000g08750.t01	Wine grape	nucleus	60.78	56.84
Solyc06g071580.2.1	Tomato	cytosol	49.02	54.08
KRH63565	Soybean	cytosol	55.35	53.34
GSMUA_Achr9P25210_001	Banana	cytosol	40.12	50.86
Solyc01g099300.2.1	Tomato	nucleus	52.49	48.81
KRH03266	Soybean	mitochondrion	48.42	47.56
GSMUA_Achr4P13250_001	Banana	cytosol	43.14	46.2
Os01t0549200-02	Rice	cytosol, peroxisome, plastid	23.98	43.8
HORVU3Hr1G046280.3	Barley	cytosol	41.78	42.68
Os11t0454800-01	Rice	cytosol	29.11	42.6
TraesCS3D01G202400.1	Wheat	cytosol	41.63	42.53
TraesCS3A01G192600.2	Wheat	cytosol	41.48	42.37
TraesCS3B01G231900.1	Wheat	cytosol	41.48	42.37
EES00907	Sorghum	cytosol	41.93	41.12
AT4G36280.1	Thale cress	cytosol	38.46	40.73
AT4G36290.1	Thale cress	cytosol	38.91	40.63
Zm00001d044506_P006	Maize	cytosol	41.93	39.66
AT4G36270.1	Thale cress	cytosol	28.36	38.68
Zm00001d043191_P005	Maize	cytosol	42.84	38.48
KXG33558	Sorghum	cytosol	42.38	38.13
TraesCS3B01G359600.1	Wheat	cytosol	40.42	38.07
TraesCS3A01G329400.1	Wheat	plastid	40.87	37.8
TraesCS3D01G322900.1	Wheat	plastid	40.87	37.69
EER87847	Sorghum	plastid	41.78	37.64
Zm00001d012575_P001	Maize	mitochondrion, nucleus	40.72	36.0
HORVU3Hr1G078330.4	Barley	endoplasmic reticulum, plasma membrane	41.03	34.09
AT4G24970.1	Thale cress	nucleus	35.29	33.1
AT5G13130.1	Thale cress	nucleus	33.79	31.64
HORVU7Hr1G048310.12	Barley	cytosol	41.33	31.28
AT5G50780.1	Thale cress	nucleus	36.05	29.18
TraesCS7A01G235300.2	Wheat	nucleus	42.23	27.92
OQU76414	Sorghum	cytosol	39.52	27.64
Zm00001d045978_P002	Maize	cytosol	38.46	26.1
TraesCS7D01G235400.1	Wheat	cytosol	41.33	26.05
TraesCS7B01G133500.2	Wheat	cytosol	40.72	24.64

Protein Annotations

MapMan:12.5.1.2	Gene3D:3.30.565.10	EntrezGene:838492	ProteinID:AAF79293.1	ProteinID:AEE29802.1	EMBL:AK221449
ArrayExpress:AT1G19100	EnsemblPlantsGene:AT1G19100	RefSeq:AT1G19100	TAIR:AT1G19100	RefSeq:AT1G19100-TAIR-G	EnsemblPlants:AT1G19100.1
TAIR:AT1G19100.1	Unigene:At.41761	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006282	GO:GO:0006325
GO:GO:0006950	GO:GO:0006952	GO:GO:0006974	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009506	GO:GO:0009536	GO:GO:0009605	GO:GO:0009607	GO:GO:0009941	GO:GO:0009987
GO:GO:0016043	GO:GO:0016569	GO:GO:0016787	GO:GO:0016887	GO:GO:0031047	GO:GO:0031935
GO:GO:0040029	GO:GO:0042803	GO:GO:0080188	GO:GO:0090305	GO:GO:1902290	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:IPR036890	RefSeq:NP_173344.2	PFAM:PF13589	PO:PO:0000013	PO:PO:0000037
PO:PO:0000191	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PANTHER:PTHR23336	PANTHER:PTHR23336:SF44	UniProt:Q56Y74	SUPFAM:SSF55874	UniParc:UPI000034F3A8

Description

MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]

Coordinates

chr1:+:6594883..6601355

Molecular Weight (calculated)

74179.2 Da

IEP (calculated)

7.934

GRAVY (calculated)

-0.426

Length

663 amino acids

Sequence
(BLAST)

001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.